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The map label for this gene is efeB [H]

Identifier: 218549249

GI number: 218549249

Start: 1959446

End: 1960717

Strand: Reverse

Name: efeB [H]

Synonym: EFER_1909

Alternate gene names: 218549249

Gene position: 1960717-1959446 (Counterclockwise)

Preceding gene: 218549250

Following gene: 218549248

Centisome position: 42.73

GC content: 54.64

Gene sequence:

>1272_bases
ATGCAGTATGAAGATGAAAACGGTGTGAATGAACCGTCACGCCGACGTTTACTGAAAGGGATTGGCGCGCTGGCACTGGC
GGGAAGTTGCCCGGTAGCGCATGCGCAAAAACCACTAAGTGCGCCGGGGACGCTTTCACCGGATGCGCGCAGTGAAGCGC
AGCCGTTTTATGGCGAACATCAGGCAGGGATCCTGACGCCACAACAGGCCGCAATGATGCTGGTGGCGTTTGATGTGCTT
GCCAGCGATAAAGCTGATCTTGAGCGATTGTTTCGCTTGTTGACTCAGCGTTTTGCTTTTCTGACTCAGGGCGGAGCGGC
ACCAGAAACGCCAAATCCACGCCTGCCACCACGCGATTCCGGCATTCTTGGCGGCTACATTGCGCCCGATAATCTCACCA
TCACGTTATCGGTGGGCCACTCATTGTTTGATGAGCGTTTTGGCCTTGCGCAGCAGATGCCGAAAAAGTTGCAGAAGATG
ACACGTTTCCCTAACGACTCGCTTGATGCGGCGTTATGTCATGGTGATGTGTTGCTACAGATTTGCGCCAATACCCAGGA
CACGGTGATCCATGCACTGCGCGATATCATTAAACACACGCCGGATTTGCTCAGTGTGCGCTGGAAGCGGGAAGGGTTTA
TTTCTGATCACGCGGCGCGCAGTAAAGGCAAAGAGACGCCGATAAATTTGCTGGGCTTTAAAGACGGCACCGCCAATCCC
GATAGCCAGAATGCGAAGTTGATGCAAAAAGTGGTGTGGGTGACGGCAGATCAGCAGGAGCCTGCCTGGGCTATCGGCGG
CAGCTACCAGGCGGTGCGGTTGATTCAGTTTCGAGTGGAATTTTGGGACAGAACGCCGCTGAAAGAACAGCAGACAATTT
TTGGTCGAGATAAGCAAACTGGTGCGCCGCTGGGAATGCAGCATGAGCACGATGTGCCGGATTATGCCAGCGACCCGGAA
GGGAAGGTGATCGCGCTGGACAGCCATATCCGGCTGGCGAATCCCCGCACGACGGAGAGCGAGTCCAGTCTGATGCTGCG
TCGTGGCTACAGTTATTCACTGGGCGTCACCAACTCCGGGCAACTGGATATGGGGTTGCTGTTTGTCTGCTACCAACACG
ATCTGGAAAAGGGCTTCCTGACAGTACAAAAAAGGCTCAATGGTGAAGCGCTGGAGGAATACGTTAAACCCATCGGCGGC
GGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAGCGATTATCTTGGAAGGGCGCTATTACAGGTTTGA

Upstream 100 bases:

>100_bases
AATTGACCGATGCCGATCGTAATGCGCTGAAAGGGCCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTG
CTGGGGCTGGATTAAGCGTT

Downstream 100 bases:

>100_bases
TCGACGCAAATATGCCCGATGCGCAGGTTTATCGGGCATGAGTTTTGTGTACAAATTATCAATCACTTGCAGGTCGGGTA
AGGTGTTCGCGCCGCATCTG

Product: iron transport heme-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MQYEDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKPLSAPGTLSPDARSEAQPFYGEHQAGILTPQQAAMMLVAFDVL
ASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPRDSGILGGYIAPDNLTITLSVGHSLFDERFGLAQQMPKKLQKM
TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNAKLMQKVVWVTADQQEPAWAIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPE
GKVIALDSHIRLANPRTTESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGG
GYFFALPGVKDASDYLGRALLQV

Sequences:

>Translated_423_residues
MQYEDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKPLSAPGTLSPDARSEAQPFYGEHQAGILTPQQAAMMLVAFDVL
ASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPRDSGILGGYIAPDNLTITLSVGHSLFDERFGLAQQMPKKLQKM
TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNAKLMQKVVWVTADQQEPAWAIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPE
GKVIALDSHIRLANPRTTESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGG
GYFFALPGVKDASDYLGRALLQV
>Mature_423_residues
MQYEDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKPLSAPGTLSPDARSEAQPFYGEHQAGILTPQQAAMMLVAFDVL
ASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPRDSGILGGYIAPDNLTITLSVGHSLFDERFGLAQQMPKKLQKM
TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNAKLMQKVVWVTADQQEPAWAIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPE
GKVIALDSHIRLANPRTTESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGG
GYFFALPGVKDASDYLGRALLQV

Specific function: May have a role as a peroxidase [H]

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787255, Length=423, Percent_Identity=96.4539007092199, Blast_Score=842, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314
- InterPro:   IPR006313
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 46621; Mature: 46621

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYEDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKPLSAPGTLSPDARSEAQPFYGEH
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPRDS
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GILGGYIAPDNLTITLSVGHSLFDERFGLAQQMPKKLQKMTRFPNDSLDAALCHGDVLLQ
CCCCCEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
HHCCCHHHHHHHHHHHHHCCCHHHEEEEHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCC
DSQNAKLMQKVVWVTADQQEPAWAIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT
CCHHHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTTESESSLMLRRGYSYSLGVTNSG
CCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHCCCCEEECCCCCC
QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDASDYLGRAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
LQV
HCC
>Mature Secondary Structure
MQYEDENGVNEPSRRRLLKGIGALALAGSCPVAHAQKPLSAPGTLSPDARSEAQPFYGEH
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPRDS
CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GILGGYIAPDNLTITLSVGHSLFDERFGLAQQMPKKLQKMTRFPNDSLDAALCHGDVLLQ
CCCCCEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
HHCCCHHHHHHHHHHHHHCCCHHHEEEEHHCCCCCHHHHHCCCCCCCEEEEEECCCCCCC
DSQNAKLMQKVVWVTADQQEPAWAIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT
CCHHHHHHHHHHHEECCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC
GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTTESESSLMLRRGYSYSLGVTNSG
CCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHCCCCEEECCCCCC
QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDASDYLGRAL
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
LQV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]