Click here to switch to the map view.

The map label for this gene is yceH [H]

Identifier: 218549205

GI number: 218549205

Start: 1911974

End: 1912648

Strand: Reverse

Name: yceH [H]

Synonym: EFER_1862

Alternate gene names: 218549205

Gene position: 1912648-1911974 (Counterclockwise)

Preceding gene: 218549206

Following gene: 218549204

Centisome position: 41.68

GC content: 50.81

Gene sequence:

>675_bases
ATGGACACCGGGGCGTTAGGAGAAAATATGAAATATGAACTGACTGCGCGGGAAGCGCGCGTTATCGGCTGCCTGCTGGA
AAAACAGGTGACTACACCTGAGCAATACCCACTGTCGCTGAATGGCGTGGTGACCGCCTGCAACCAAAAAACGAACCGTG
AACCAGTGATGAATTTATCCGAGCAAGAGGTGCAAACTGAGCTGGATAATCTGGTGAAACGCCACTTTCTGCGTACCGTA
AGCGGTTTTGGTAACCGAGTTACGAAATATGAGCAGCGCTTTTGTAACTCAGAATTTGGTGATTTAAAACTGAGTCCGGC
AGAAGTGGCCTTAATCACCACCTTATTGTTACGGGGAGCGCAAACGCCAGGTGAACTACGTAGCCGTGCAGCAAGAATGT
ACGAATTCAGTGATATGTCTGAAGTTGACAGTACACTGGAAAAGCTGGCGCAGCGCGAAGATGGTCCGTTTGTTGTTCGA
CTGGCGCGCGAGCCAGGCAAGCGGGAAAGCCGCTATATGCATCTGTTTTGTGGTGAAGTCGATGATACCGCGAGTTTTGC
CGAAGAGACACCACCAGTAGCGGGCGAACTTCAGGCGCGGGTCGAAGCACTGGAAAACGAAGTCGCAGAACTGAAACAAC
GTCTGGATTCTCTATTGGCCCACCTGGGAGATTAA

Upstream 100 bases:

>100_bases
TGGCGCGACTGGGCTTTGAAAAAGAAGGCTATGCCAAAAATTATTTGCAGATTGATGGTGTCTGGCGGGATCACGTGTTA
ACCGCATTGACAACACCTGA

Downstream 100 bases:

>100_bases
CGTGAAAAAATTACGCATTGGTGTCGTCGGTCTGGGCAATATTGCACAAAAAGCCTGGTTACCGGTGCTGAGTGCTGCGC
AAGACTGGAGTATACAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MDTGALGENMKYELTAREARVIGCLLEKQVTTPEQYPLSLNGVVTACNQKTNREPVMNLSEQEVQTELDNLVKRHFLRTV
SGFGNRVTKYEQRFCNSEFGDLKLSPAEVALITTLLLRGAQTPGELRSRAARMYEFSDMSEVDSTLEKLAQREDGPFVVR
LAREPGKRESRYMHLFCGEVDDTASFAEETPPVAGELQARVEALENEVAELKQRLDSLLAHLGD

Sequences:

>Translated_224_residues
MDTGALGENMKYELTAREARVIGCLLEKQVTTPEQYPLSLNGVVTACNQKTNREPVMNLSEQEVQTELDNLVKRHFLRTV
SGFGNRVTKYEQRFCNSEFGDLKLSPAEVALITTLLLRGAQTPGELRSRAARMYEFSDMSEVDSTLEKLAQREDGPFVVR
LAREPGKRESRYMHLFCGEVDDTASFAEETPPVAGELQARVEALENEVAELKQRLDSLLAHLGD
>Mature_224_residues
MDTGALGENMKYELTAREARVIGCLLEKQVTTPEQYPLSLNGVVTACNQKTNREPVMNLSEQEVQTELDNLVKRHFLRTV
SGFGNRVTKYEQRFCNSEFGDLKLSPAEVALITTLLLRGAQTPGELRSRAARMYEFSDMSEVDSTLEKLAQREDGPFVVR
LAREPGKRESRYMHLFCGEVDDTASFAEETPPVAGELQARVEALENEVAELKQRLDSLLAHLGD

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family [H]

Homologues:

Organism=Escherichia coli, GI1787306, Length=215, Percent_Identity=86.9767441860465, Blast_Score=383, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007432
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04337 DUF480 [H]

EC number: NA

Molecular weight: Translated: 25127; Mature: 25127

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGALGENMKYELTAREARVIGCLLEKQVTTPEQYPLSLNGVVTACNQKTNREPVMNLS
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCHHCCCH
EQEVQTELDNLVKRHFLRTVSGFGNRVTKYEQRFCNSEFGDLKLSPAEVALITTLLLRGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
QTPGELRSRAARMYEFSDMSEVDSTLEKLAQREDGPFVVRLAREPGKRESRYMHLFCGEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHEEEEECCCC
DDTASFAEETPPVAGELQARVEALENEVAELKQRLDSLLAHLGD
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTGALGENMKYELTAREARVIGCLLEKQVTTPEQYPLSLNGVVTACNQKTNREPVMNLS
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEECCCCCCCCHHCCCH
EQEVQTELDNLVKRHFLRTVSGFGNRVTKYEQRFCNSEFGDLKLSPAEVALITTLLLRGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
QTPGELRSRAARMYEFSDMSEVDSTLEKLAQREDGPFVVRLAREPGKRESRYMHLFCGEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHEEEEECCCC
DDTASFAEETPPVAGELQARVEALENEVAELKQRLDSLLAHLGD
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA