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The map label for this gene is chaC [H]

Identifier: 218549090

GI number: 218549090

Start: 1793051

End: 1793746

Strand: Reverse

Name: chaC [H]

Synonym: EFER_1742

Alternate gene names: 218549090

Gene position: 1793746-1793051 (Counterclockwise)

Preceding gene: 218549091

Following gene: 218549088

Centisome position: 39.09

GC content: 53.16

Gene sequence:

>696_bases
GTGTTAACGCGTGATTTCCTAATCAATGCTGATTGCAAAACGGCATTTGGTACTATTGAAGAATCACTATTGTGGTCCGC
GGAACAACGTGCGGCCTCGCTGGCAGCAACTCTTGCCTGTCGCCCTGATGAGGGGGCTGTGTGGATCTTCGGTTATGGAT
CATTGATGTGGAATCCAGCTCTGGAATATGAAGAGTCGTGCACAGGCACACTACCTGGCTGGCATCGTGCCTTTTGTTTG
CGGTTAACTGCCGGACGGGGAACTGCGCACCAACCTGGGCGGATGCTTGCGCTAAAAGAGGGCGGACGCACCACCGGTGT
TGCCTATCGGTTAGCAGAGGATTCCCTGGAGCAAGAGCTGACACTGTTATGGAAACGCGAAATGATCACCGGGTGTTATT
TGCCAACCTGGTGTCAACTTGACCTTGATGACGGCAGAACAGTAAATGCACTGGTATTTATCATGGACCCACGACATCCG
CTGTATGAGTCGGACACTCGCGCTCAGGTCATTGCCCCATTGATTGCTGCGGCCTGTGGGCCCCTTGGCACAAATGCGCA
ATATTTGTTTGCCCTTGAGCAGGAGTTGAACAAGCTGGGAATGCAGGACGATGGCCTCAATGATTTGCTGGTGTCGGTGA
GAAAACTGGTGGCGGATAATTTCCCGGATGGCGTGCTACGGCCTGGTTTCGCCTGA

Upstream 100 bases:

>100_bases
ATTGCATATTGTCCTGTTACTGGTTTCATGAAAAGCAGCAAAAATATCCAAAAAGTGTCAAAAAAGTCGTGCAGGGAAGC
CGCAGTGGCGGAGGTGTAAG

Downstream 100 bases:

>100_bases
TGCAGCGTCACATTTACGGGGCAGCTGCCAGGTAGCTCAGCCCCGTAAATATTTAAAACGTTAATACTTTGTCAGCATTC
AGTGTCCACTGTGCCAGTTC

Product: regulatory protein for cation transport

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLTRDFLINADCKTAFGTIEESLLWSAEQRAASLAATLACRPDEGAVWIFGYGSLMWNPALEYEESCTGTLPGWHRAFCL
RLTAGRGTAHQPGRMLALKEGGRTTGVAYRLAEDSLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNALVFIMDPRHP
LYESDTRAQVIAPLIAAACGPLGTNAQYLFALEQELNKLGMQDDGLNDLLVSVRKLVADNFPDGVLRPGFA

Sequences:

>Translated_231_residues
MLTRDFLINADCKTAFGTIEESLLWSAEQRAASLAATLACRPDEGAVWIFGYGSLMWNPALEYEESCTGTLPGWHRAFCL
RLTAGRGTAHQPGRMLALKEGGRTTGVAYRLAEDSLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNALVFIMDPRHP
LYESDTRAQVIAPLIAAACGPLGTNAQYLFALEQELNKLGMQDDGLNDLLVSVRKLVADNFPDGVLRPGFA
>Mature_231_residues
MLTRDFLINADCKTAFGTIEESLLWSAEQRAASLAATLACRPDEGAVWIFGYGSLMWNPALEYEESCTGTLPGWHRAFCL
RLTAGRGTAHQPGRMLALKEGGRTTGVAYRLAEDSLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNALVFIMDPRHP
LYESDTRAQVIAPLIAAACGPLGTNAQYLFALEQELNKLGMQDDGLNDLLVSVRKLVADNFPDGVLRPGFA

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=178, Percent_Identity=34.2696629213483, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI56790287, Length=177, Percent_Identity=32.2033898305085, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI145693119, Length=231, Percent_Identity=92.2077922077922, Blast_Score=442, Evalue=1e-126,
Organism=Caenorhabditis elegans, GI17560078, Length=186, Percent_Identity=31.1827956989247, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45553467, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24649389, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24649391, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24649393, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24641578, Length=185, Percent_Identity=30.2702702702703, Blast_Score=78, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 25471; Mature: 25471

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRDFLINADCKTAFGTIEESLLWSAEQRAASLAATLACRPDEGAVWIFGYGSLMWNPA
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCEEECCC
LEYEESCTGTLPGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLAEDSLEQEL
CCCCCCCCCCCCCHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHH
TLLWKREMITGCYLPTWCQLDLDDGRTVNALVFIMDPRHPLYESDTRAQVIAPLIAAACG
HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
PLGTNAQYLFALEQELNKLGMQDDGLNDLLVSVRKLVADNFPDGVLRPGFA
CCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLTRDFLINADCKTAFGTIEESLLWSAEQRAASLAATLACRPDEGAVWIFGYGSLMWNPA
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECCEEECCC
LEYEESCTGTLPGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLAEDSLEQEL
CCCCCCCCCCCCCHHEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHH
TLLWKREMITGCYLPTWCQLDLDDGRTVNALVFIMDPRHPLYESDTRAQVIAPLIAAACG
HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
PLGTNAQYLFALEQELNKLGMQDDGLNDLLVSVRKLVADNFPDGVLRPGFA
CCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]