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The map label for this gene is ychP [H]

Identifier: 218549088

GI number: 218549088

Start: 1791062

End: 1792315

Strand: Reverse

Name: ychP [H]

Synonym: EFER_1740

Alternate gene names: 218549088

Gene position: 1792315-1791062 (Counterclockwise)

Preceding gene: 218549090

Following gene: 218549085

Centisome position: 39.06

GC content: 50.48

Gene sequence:

>1254_bases
ATGGCGGTAGAAAGTCGTGATGGTGAAAAGCACTTTGCTGAAATTGTGAAAGATTTTGGCGAAACCAGCATGACTGATAA
CGGCCTGGATACCGGCGAGCAGGCTAAATCTTTTGCCCTGGGTAAGGTGCGGGATGCACTTAGTCAGCAGATTAACCAAC
ATGTAGAAACCTGGCTTTCGCCGTGGGGAAACGCCAGTGTTGATGTCAAAGTGGATAACGAAGGGAATTTTAGTGGCAGC
AGGGGGAGTTGGTTTGTGCCCATAAAGGATAATGATCATTATCTGACATGGAGTCAGTTAGGGCTTACCCAGCAAGATGA
TGGACTGGTGAGCAATCTTGGTCTGGGGCAACGCTGGGCGCGCGGCAACTGGTTGGTGGGATATAACACTTTTTATGACA
ACTTGCTGGATCAAAATCTCCAGCGAGCGGGCTTCGGTGCCGAAGCGTGGGGGGAATATTTGCGATTGTCAGCAAACTAT
TACCAGCCGTTTGCCTCCTGGCATGAACAAAGCGCCACGCTGGAGCAACGAATGGCACGCGGTTACGACCTGACCGCCCG
GATGCGAATGCCGTTTTATCAACATCTCAATACCAGCTTCAGTGTCGAACAATATTTTGGCGATAGCGTCGATCTGTTTA
ACTCTGGCTCCGGCTATCATAATCCCGTCGCCCTGAGTCTGGGGTTGAATTACACACCTGTACCATTATTAACGGTGACA
GCCCAGCATAAACAAGGCGAAAGTGGAGAAAGTCAAAATAACCTTGGATTAAATCTCAATTACCGCTTTGGAGTGCCACT
TAAAAAACAAATTTCCGCAGGCGAAGTTGCTGAAAGCCAGTCGCTGCGGGGAAGTCGTTATGATAATCCACAGCGGAATA
ATCTGCCGACAGTTGAATATCGCCAGCGCCAAACACTAAGTGTTTATCTGGCGACACCTCCATGGGATCTAAGACCTGGC
GAAACAGTAGCACTGAAAGTGCAGGTCCGTAGTCGTTACGGTATTCGACAACTGATTTGGCAGGGCGATACGCAGATATT
AAGTTTGACGCCGGGCGCACAAGCCAATAGCGCGGAGGGCTGGACGCTGATCATGCCTGACTGGCAAAACGGGGAAGGGG
CAAGCAATCACTGGCGATTGTCGGTGGTGGTGGAAGATAACCAGGGGCAGCGTGTCTCCTCCAATGAGATCACGCTAACG
CTTGTCGAACCGTTCGACGCATTGTCAAACGACGAACTGCGCTGGGAACCGTAA

Upstream 100 bases:

>100_bases
ACTGCTGCTGACGTGCGGTATGGCAAACGCGCAATCAAACTTTATCCGGCAAGCACAAAATCCCTTTGATAATAATGCTG
ACGGTTTACCAGATTTAGGC

Downstream 100 bases:

>100_bases
TCAGAAAATGCGCTCCTGATGCACCCATACCGCTGCTTCCACGCGAGACTTGAGCTTCATTTTCTTCAGCATGTGCTTGA
CGTGCACTTTTACTGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAVESRDGEKHFAEIVKDFGETSMTDNGLDTGEQAKSFALGKVRDALSQQINQHVETWLSPWGNASVDVKVDNEGNFSGS
RGSWFVPIKDNDHYLTWSQLGLTQQDDGLVSNLGLGQRWARGNWLVGYNTFYDNLLDQNLQRAGFGAEAWGEYLRLSANY
YQPFASWHEQSATLEQRMARGYDLTARMRMPFYQHLNTSFSVEQYFGDSVDLFNSGSGYHNPVALSLGLNYTPVPLLTVT
AQHKQGESGESQNNLGLNLNYRFGVPLKKQISAGEVAESQSLRGSRYDNPQRNNLPTVEYRQRQTLSVYLATPPWDLRPG
ETVALKVQVRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLT
LVEPFDALSNDELRWEP

Sequences:

>Translated_417_residues
MAVESRDGEKHFAEIVKDFGETSMTDNGLDTGEQAKSFALGKVRDALSQQINQHVETWLSPWGNASVDVKVDNEGNFSGS
RGSWFVPIKDNDHYLTWSQLGLTQQDDGLVSNLGLGQRWARGNWLVGYNTFYDNLLDQNLQRAGFGAEAWGEYLRLSANY
YQPFASWHEQSATLEQRMARGYDLTARMRMPFYQHLNTSFSVEQYFGDSVDLFNSGSGYHNPVALSLGLNYTPVPLLTVT
AQHKQGESGESQNNLGLNLNYRFGVPLKKQISAGEVAESQSLRGSRYDNPQRNNLPTVEYRQRQTLSVYLATPPWDLRPG
ETVALKVQVRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLT
LVEPFDALSNDELRWEP
>Mature_416_residues
AVESRDGEKHFAEIVKDFGETSMTDNGLDTGEQAKSFALGKVRDALSQQINQHVETWLSPWGNASVDVKVDNEGNFSGSR
GSWFVPIKDNDHYLTWSQLGLTQQDDGLVSNLGLGQRWARGNWLVGYNTFYDNLLDQNLQRAGFGAEAWGEYLRLSANYY
QPFASWHEQSATLEQRMARGYDLTARMRMPFYQHLNTSFSVEQYFGDSVDLFNSGSGYHNPVALSLGLNYTPVPLLTVTA
QHKQGESGESQNNLGLNLNYRFGVPLKKQISAGEVAESQSLRGSRYDNPQRNNLPTVEYRQRQTLSVYLATPPWDLRPGE
TVALKVQVRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTL
VEPFDALSNDELRWEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intimin/invasin family [H]

Homologues:

Organism=Escherichia coli, GI145693120, Length=417, Percent_Identity=91.6067146282974, Blast_Score=782, Evalue=0.0,
Organism=Escherichia coli, GI145693153, Length=376, Percent_Identity=31.6489361702128, Blast_Score=172, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46923; Mature: 46792

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVESRDGEKHFAEIVKDFGETSMTDNGLDTGEQAKSFALGKVRDALSQQINQHVETWLS
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PWGNASVDVKVDNEGNFSGSRGSWFVPIKDNDHYLTWSQLGLTQQDDGLVSNLGLGQRWA
CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEHHHCCCCCCCCCHHHCCCCCCEEC
RGNWLVGYNTFYDNLLDQNLQRAGFGAEAWGEYLRLSANYYQPFASWHEQSATLEQRMAR
CCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHC
GYDLTARMRMPFYQHLNTSFSVEQYFGDSVDLFNSGSGYHNPVALSLGLNYTPVPLLTVT
CCCEEEEECCCHHHHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEE
AQHKQGESGESQNNLGLNLNYRFGVPLKKQISAGEVAESQSLRGSRYDNPQRNNLPTVEY
ECCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCEEE
RQRQTLSVYLATPPWDLRPGETVALKVQVRSRYGIRQLIWQGDTQILSLTPGAQANSAEG
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCC
WTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
EEEECCCCCCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
AVESRDGEKHFAEIVKDFGETSMTDNGLDTGEQAKSFALGKVRDALSQQINQHVETWLS
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PWGNASVDVKVDNEGNFSGSRGSWFVPIKDNDHYLTWSQLGLTQQDDGLVSNLGLGQRWA
CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEHHHCCCCCCCCCHHHCCCCCCEEC
RGNWLVGYNTFYDNLLDQNLQRAGFGAEAWGEYLRLSANYYQPFASWHEQSATLEQRMAR
CCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHC
GYDLTARMRMPFYQHLNTSFSVEQYFGDSVDLFNSGSGYHNPVALSLGLNYTPVPLLTVT
CCCEEEEECCCHHHHCCCCEEHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEE
AQHKQGESGESQNNLGLNLNYRFGVPLKKQISAGEVAESQSLRGSRYDNPQRNNLPTVEY
ECCCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCEEE
RQRQTLSVYLATPPWDLRPGETVALKVQVRSRYGIRQLIWQGDTQILSLTPGAQANSAEG
CCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCC
WTLIMPDWQNGEGASNHWRLSVVVEDNQGQRVSSNEITLTLVEPFDALSNDELRWEP
EEEECCCCCCCCCCCCEEEEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2657652; 2649492; 7567469 [H]