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The map label for this gene is yciH [H]

Identifier: 218549024

GI number: 218549024

Start: 1719360

End: 1719689

Strand: Reverse

Name: yciH [H]

Synonym: EFER_1672

Alternate gene names: 218549024

Gene position: 1719689-1719360 (Counterclockwise)

Preceding gene: 218549025

Following gene: 218549010

Centisome position: 37.48

GC content: 42.42

Gene sequence:

>330_bases
ATGATGAATGATTCAAATAGCCGCCTTGTTTACTCAACTGAGACAGGGCGTATTGATGAGCCCAAAGTTGTAGCTGAACG
CCCGAAAGGAGATGGGATTATACGTATTCAACGTCAAACCAGTGGTCGAAAAGGTAAGGGCGTTTGTTTGATTACAGGTG
TTGATCTCCCTGATGCAGAACTGGCTAAGTTGGCAGCAGAGTTGAAGAAAAAATGTGGCTGTGGTGGATCTCTTAAAGAC
GGTATAATTGAAATACAAGGCGATAAGCGAGATTTAATTAAAACTTTGCTGGAAGCCAAAGGTATGAAGGTTAAACTGGC
TGGTGGTTAA

Upstream 100 bases:

>100_bases
CAGCAGGCGTAGATTATATGGTTATTGGACGCCCGGTAACGCAATCTGAAGATCCTGCCCAGACACTGAAAACCATCAAT
GCATCTTTAAAAGGACATGG

Downstream 100 bases:

>100_bases
AAATTAAAGCCACGGTTTAAACATCGTGGCTTTAAATTTCATAATGCAATTATTTCGTTTCACAAAAATAATGACTGTAA
AACGTTCATTACCAATTTAA

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MMNDSNSRLVYSTETGRIDEPKVVAERPKGDGIIRIQRQTSGRKGKGVCLITGVDLPDAELAKLAAELKKKCGCGGSLKD
GIIEIQGDKRDLIKTLLEAKGMKVKLAGG

Sequences:

>Translated_109_residues
MMNDSNSRLVYSTETGRIDEPKVVAERPKGDGIIRIQRQTSGRKGKGVCLITGVDLPDAELAKLAAELKKKCGCGGSLKD
GIIEIQGDKRDLIKTLLEAKGMKVKLAGG
>Mature_109_residues
MMNDSNSRLVYSTETGRIDEPKVVAERPKGDGIIRIQRQTSGRKGKGVCLITGVDLPDAELAKLAAELKKKCGCGGSLKD
GIIEIQGDKRDLIKTLLEAKGMKVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=108, Percent_Identity=87.037037037037, Blast_Score=189, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11653; Mature: 11653

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDSNSRLVYSTETGRIDEPKVVAERPKGDGIIRIQRQTSGRKGKGVCLITGVDLPDAE
CCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHH
LAKLAAELKKKCGCGGSLKDGIIEIQGDKRDLIKTLLEAKGMKVKLAGG
HHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MMNDSNSRLVYSTETGRIDEPKVVAERPKGDGIIRIQRQTSGRKGKGVCLITGVDLPDAE
CCCCCCCEEEEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHH
LAKLAAELKKKCGCGGSLKDGIIEIQGDKRDLIKTLLEAKGMKVKLAGG
HHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]