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The map label for this gene is pspC [H]

Identifier: 218549008

GI number: 218549008

Start: 1703263

End: 1703625

Strand: Reverse

Name: pspC [H]

Synonym: EFER_1656

Alternate gene names: 218549008

Gene position: 1703625-1703263 (Counterclockwise)

Preceding gene: 218549009

Following gene: 218549007

Centisome position: 37.13

GC content: 48.21

Gene sequence:

>363_bases
ATGGCGAGTATCAACCTCAATAAAAAACTTTGGCGTATTCCGCAGCAGGGGATGCTACAGGGTGTCTGCGCCGGGATCGC
CAACTATTTAGACGTCCCTGTGAAGTGGGTACGTATTCTGGTCGTGGTGTTATCAATATTCTTTGGTATGGCCCTGTTTA
CTTTGGTCGGTTATATCGTCTTATCGTTTGTCCTTGACCCGATGCCGGACAATATGGCTTCCGGTGAAGTGCAACCCACC
AGTAGTGAATTGTTGGATGCAGTAGATCGTCAACTGGCTGAAGGCGAACAACGACTGCGAGATATGGAACGCTACGTGAC
ATCAGATACATTCACACTACGCAGCCGTTTTCGTCAATTGTGA

Upstream 100 bases:

>100_bases
GATTAGCGCAACTGAGCGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCCCTGGAAGATATTCTTGATGCTGAACAT
CCGAACTGGAGGGATCGCTA

Downstream 100 bases:

>100_bases
GGTAACGAATGAATAATCGCTGGCAACATGTCGGGCAAAAGGTCAAGCCTGGTTTTAAATTAGCAGGCAAGCTGCTCTTA
CTGACTGCTCTGCGCTACGG

Product: DNA-binding transcriptional activator PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MASINLNKKLWRIPQQGMLQGVCAGIANYLDVPVKWVRILVVVLSIFFGMALFTLVGYIVLSFVLDPMPDNMASGEVQPT
SSELLDAVDRQLAEGEQRLRDMERYVTSDTFTLRSRFRQL

Sequences:

>Translated_120_residues
MASINLNKKLWRIPQQGMLQGVCAGIANYLDVPVKWVRILVVVLSIFFGMALFTLVGYIVLSFVLDPMPDNMASGEVQPT
SSELLDAVDRQLAEGEQRLRDMERYVTSDTFTLRSRFRQL
>Mature_119_residues
ASINLNKKLWRIPQQGMLQGVCAGIANYLDVPVKWVRILVVVLSIFFGMALFTLVGYIVLSFVLDPMPDNMASGEVQPTS
SELLDAVDRQLAEGEQRLRDMERYVTSDTFTLRSRFRQL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=120, Percent_Identity=83.3333333333333, Blast_Score=203, Evalue=3e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 13611; Mature: 13480

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASINLNKKLWRIPQQGMLQGVCAGIANYLDVPVKWVRILVVVLSIFFGMALFTLVGYIV
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFVLDPMPDNMASGEVQPTSSELLDAVDRQLAEGEQRLRDMERYVTSDTFTLRSRFRQL
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASINLNKKLWRIPQQGMLQGVCAGIANYLDVPVKWVRILVVVLSIFFGMALFTLVGYIV
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFVLDPMPDNMASGEVQPTSSELLDAVDRQLAEGEQRLRDMERYVTSDTFTLRSRFRQL
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]