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The map label for this gene is pcaC [H]

Identifier: 218548983

GI number: 218548983

Start: 1678231

End: 1678638

Strand: Reverse

Name: pcaC [H]

Synonym: EFER_1631

Alternate gene names: 218548983

Gene position: 1678638-1678231 (Counterclockwise)

Preceding gene: 218548984

Following gene: 218548981

Centisome position: 36.58

GC content: 48.28

Gene sequence:

>408_bases
TTGAGTTTTGTGGGGGCAACAATGCGCGATGAAGAACGTTATCAGCAAGGGATGTTAGTCCGCCGTGGTGTGCTGGGTGA
TGAGCATGTTGATCGTACATTGCAAAATCTCACTTCGCTGAACGAAGAGTTTCAGGATTTTATTACCCGCTTTGCATGGG
GTGATATCTGGAGTCGTCCGGGTCTGGAGCGCCATACCCGCAGTATGATTACTATTGCTATGTTGATTGCACTCAACCGC
GAAGCCGAACTCAAAATGCATCTCAATGCAGCGTTCAATAATGGCGTGACAAAAGAAGAGTTGAAAGAACTGATTATGCA
CTCAGCTCTTTATTGCGGGCTGCCAGCGGCAAACGCCTCAATGCATCTCGCTCAGCAAATTTTCGCTGAGCGTGAGGCTG
CCGAATAA

Upstream 100 bases:

>100_bases
CAGTTCATGCAGCAGAAAATAGACGGCTCTCGCCTGGAAATTGTGACAGCGTCACATTTGTCCTCCATCGAAGCGCCGGA
AGTGGTAAATGCTTTATTAA

Downstream 100 bases:

>100_bases
GCATGACTTTATCGCGCCAGGGTGCCAGTAATCAGCACCTGGCGCAAACTTCAGGCTGCTAACACCCGATTACGACCATC
ATTTTTTGCCCGATACAACG

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSFVGATMRDEERYQQGMLVRRGVLGDEHVDRTLQNLTSLNEEFQDFITRFAWGDIWSRPGLERHTRSMITIAMLIALNR
EAELKMHLNAAFNNGVTKEELKELIMHSALYCGLPAANASMHLAQQIFAEREAAE

Sequences:

>Translated_135_residues
MSFVGATMRDEERYQQGMLVRRGVLGDEHVDRTLQNLTSLNEEFQDFITRFAWGDIWSRPGLERHTRSMITIAMLIALNR
EAELKMHLNAAFNNGVTKEELKELIMHSALYCGLPAANASMHLAQQIFAEREAAE
>Mature_134_residues
SFVGATMRDEERYQQGMLVRRGVLGDEHVDRTLQNLTSLNEEFQDFITRFAWGDIWSRPGLERHTRSMITIAMLIALNRE
AELKMHLNAAFNNGVTKEELKELIMHSALYCGLPAANASMHLAQQIFAEREAAE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 15424; Mature: 15293

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVGATMRDEERYQQGMLVRRGVLGDEHVDRTLQNLTSLNEEFQDFITRFAWGDIWSRP
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLERHTRSMITIAMLIALNREAELKMHLNAAFNNGVTKEELKELIMHSALYCGLPAANAS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHH
MHLAQQIFAEREAAE
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFVGATMRDEERYQQGMLVRRGVLGDEHVDRTLQNLTSLNEEFQDFITRFAWGDIWSRP
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLERHTRSMITIAMLIALNREAELKMHLNAAFNNGVTKEELKELIMHSALYCGLPAANAS
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHH
MHLAQQIFAEREAAE
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]