Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is paaK [H]
Identifier: 218548950
GI number: 218548950
Start: 1642684
End: 1643997
Strand: Reverse
Name: paaK [H]
Synonym: EFER_1598
Alternate gene names: 218548950
Gene position: 1643997-1642684 (Counterclockwise)
Preceding gene: 218548951
Following gene: 218548949
Centisome position: 35.83
GC content: 51.83
Gene sequence:
>1314_bases ATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAA ATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGAAAATTCGACGCAGCAGGTGTACATCCTGATGATT TCAGGGAACTTTCAGACCTGCGTAAATTTCCCTGTACCACCAAGCAGGATCTGCGCGACAACTATCCCTTTGACACCTTT GCCGTGCCGATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACACA AAACGATATTGATAACTGGGCCAATATCGTAGCGCGTTCCTTGCGTGCGGCAGGTGGCACGCCCAAAGACAAAATTCATG TCGCCTATGGTTACGGCCTGTTTACCGGTGGGCTGGGCGCGCACTATGGTGCAGAACGCCTGGGCGCTACGGTGATCCCG ATGTCTGGCGGGCAGACGGAAAAACAAGCGCAACTGATCCGCGATTTTCAACCGGATATGATCATGGTTACGCCATCTTA TTGCCTTAACCTGATTGAAGAGCTGGAACGGCAGTTGGGCGGTGATGCCAGCGGTTGCTCGCTGCGAGTTGGAGTGTTTG GTGCTGAGCCGTGGACACAGGCCATGCGTAAAGAGATTGAACGGCGTCTGGGGATCACTGCGCTGGATATTTATGGCCTG TCAGAAGTGATGGGGCCGGGGGTCGCGATGGAGTGTCTGGAAACTACCGACGGCCCAACCATTTGGGAAGATCATTTCTA TCCTGAAATTGTTAATCCCAATGACGGCACACCGCTTGCCGATGGCGAACATGGCGAACTGTTATTCACCACGCTGACCA AAGAAGCATTGCCGGTTATTCGTTACCGTACGCGTGATTTAACCCGACTGTTGCCAGGAACGGCACGAACCATGCGCCGC ATGGATCGCATCAGTGGACGTAGCGATGACATGTTGATCATTCGCGGTGTAAATGTCTTCCCGTCACAACTGGAAGAAGA GATTGTCAAATTCGAACATTTATCGCCGCATTACCAACTGGAGGTTAACCGTCGGGGGCATCTTGATTCACTTTCTGTGA AAGTGGAGTTGAAAGAAAGCAGCCTGACATTGACGCATGAGCAGCGTTGCCAGGTGTGCCACCAGCTGCGCCATCGGATT AAATCGATGGTGGGGATCTCTACTGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCG GGTGTTTGATCTGCGCAATATTGTTGGTGCCTGA
Upstream 100 bases:
>100_bases ACGGTCGTTACGCATTATGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGAGCATAT CAACCTGCGAGTATCCTACA
Downstream 100 bases:
>100_bases TGTGTCGCCTGGTCCTGGTGGGTGAACTGCCAGGGCCAGAAGTCGATACGACCTGTGCTATGATTCATAAATCACAACAA TAACAACAGACTGAATCGAA
Product: phenylacetyl-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTF AVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGTPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIP MSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGL SEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPNDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRR MDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRI KSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
Sequences:
>Translated_437_residues MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTF AVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGTPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIP MSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGL SEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPNDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRR MDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRI KSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA >Mature_437_residues MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDLRKFPCTTKQDLRDNYPFDTF AVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARSLRAAGGTPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIP MSGGQTEKQAQLIRDFQPDMIMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGL SEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPNDGTPLADGEHGELLFTTLTKEALPVIRYRTRDLTRLLPGTARTMRR MDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQLEVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRI KSMVGISTDVMIVNCGSIPRSEGKACRVFDLRNIVGA
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=437, Percent_Identity=99.5423340961098, Blast_Score=906, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 48945; Mature: 48945
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHH RKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARS HHCCCCCHHHHHCCCCCCHHHHCHHHHHEEECCCCCCCCCEEEEECHHHHHHHHHHHHHH LRAAGGTPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDM HHHCCCCCCCEEEEEEECHHHCCCCCHHCCHHHHCCEEEECCCCCCHHHHHHHHHCCCCE IMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGL EEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCH SEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPNDGTPLADGEHGELLFTTLTKEALPVI HHHHCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH RYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQL HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEE EVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPR EECCCCCCCEEEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC SEGKACRVFDLRNIVGA CCCCEEEEEEHHHHHCC >Mature Secondary Structure MITNTKLDPIETASVDELQALQTQRLKWTLKHAYENVPMYRRKFDAAGVHPDDFRELSDL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHH RKFPCTTKQDLRDNYPFDTFAVPMEQVVRIHASSGTTGKPTVVGYTQNDIDNWANIVARS HHCCCCCHHHHHCCCCCCHHHHCHHHHHEEECCCCCCCCCEEEEECHHHHHHHHHHHHHH LRAAGGTPKDKIHVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQAQLIRDFQPDM HHHCCCCCCCEEEEEEECHHHCCCCCHHCCHHHHCCEEEECCCCCCHHHHHHHHHCCCCE IMVTPSYCLNLIEELERQLGGDASGCSLRVGVFGAEPWTQAMRKEIERRLGITALDIYGL EEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCH SEVMGPGVAMECLETTDGPTIWEDHFYPEIVNPNDGTPLADGEHGELLFTTLTKEALPVI HHHHCCCHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHH RYRTRDLTRLLPGTARTMRRMDRISGRSDDMLIIRGVNVFPSQLEEEIVKFEHLSPHYQL HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEE EVNRRGHLDSLSVKVELKESSLTLTHEQRCQVCHQLRHRIKSMVGISTDVMIVNCGSIPR EECCCCCCCEEEEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC SEGKACRVFDLRNIVGA CCCCEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]