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The map label for this gene is benC [H]

Identifier: 218548841

GI number: 218548841

Start: 1520432

End: 1521451

Strand: Direct

Name: benC [H]

Synonym: EFER_1484

Alternate gene names: 218548841

Gene position: 1520432-1521451 (Clockwise)

Preceding gene: 218548840

Following gene: 218548842

Centisome position: 33.13

GC content: 51.86

Gene sequence:

>1020_bases
ATGATGAGTTTTACAATCGCACTCAATTTTGAAGACGGGATCACCCGATTTATTCAGTGTAACCAGGGTGAAAAAGTGTT
GGATGCTGCCTACCGACAGAAGGTCAATCTGCCGATGGATTGCTCTGACGGCGTATGTGGCACTTGCAAATGCCATTGTG
CCAGCGGCGAATATGCGTTGGGTGAGGATTATCTTGAGGATGCTCTCAGTGAAGATGAAGCACTGGCTCGTCAGGTGTTG
ACGTGTCAGATGATCCCAACCAGCGATTGTGTCATTGATATTCCTGTGGCAGCGGCGCAATGCAAAACGGCGATTACCAC
GACAGACGCAGAAGTCGTACAGGTCACGATGCTATCGGATACCGCCATTGAGCTGGTGGTACAACTGGATGAACCACTGA
CGTTTTTACCCGGCCAGTACATTAACATTCAAGTGCCAGGAACACCGCAAGTGCGCGCTTATTCATTTAGCTCCTTAGCG
GGCAGTCGGGAAGGGCGATTTTTGATTCGTAACGTACCCGGCGGAATGATGAGTCAGTGGTTAACGCAACGAGCGCAACC
GGGCGATCGCCTTAGCCTCAGTGGTCCGATGGGCAGCTTTTATTTACGCAGTGGTGAACGCCCATTGTTAATGCTGGCAG
GAGGAACAGGGCTGGCGCCATTGTTGTCGATGCTGGAGACATTACAGGCCAAGGGCAGTACACGCCCGGTGACGTTGTTA
TATGGCGTAACACTGGATTGCGATCTGGTTAAAACCCAGGAGCTGGATGCGTTCGCTCGTCAATTGAGCCAGTTTCGTTG
GCTTCCGGTGGTGAGTGATGCGCAAAGCAATTGCCCACAGCGGGGATATGTTACGGAGCATCTGGATGATGCGATGTTGA
ATAATGGCGATGTGGATATCTATCTTTGTGGGCCGCCACCGATGGTGAATGCCGTAGCAACGGCACTTCGCGAAAGAGGA
ATCTCCCCGGCAGGTTTCTGGTATGAAAAATTTATCGCCAGCCAGAGCGCGGCGGCATAA

Upstream 100 bases:

>100_bases
CATCGAGATTGATGGCAAACCGCAGATTATTCGTAAAACCGTACGCCTGAATAATGACTATATCCGTCAGGTGATCGACG
TTTACCACATTTGAGGAGGC

Downstream 100 bases:

>100_bases
GGAACAAAAATGCGATTTCAAAATAAAGTCATGGCGATAACCGGTGCAGCACAAGGCATCGGTCGGCAAACCGCTGAACA
AGCAGCCCGTGAAGGGGCGC

Product: benzoate 1,2-dioxygenase ferredoxin reductase subunit

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MMSFTIALNFEDGITRFIQCNQGEKVLDAAYRQKVNLPMDCSDGVCGTCKCHCASGEYALGEDYLEDALSEDEALARQVL
TCQMIPTSDCVIDIPVAAAQCKTAITTTDAEVVQVTMLSDTAIELVVQLDEPLTFLPGQYINIQVPGTPQVRAYSFSSLA
GSREGRFLIRNVPGGMMSQWLTQRAQPGDRLSLSGPMGSFYLRSGERPLLMLAGGTGLAPLLSMLETLQAKGSTRPVTLL
YGVTLDCDLVKTQELDAFARQLSQFRWLPVVSDAQSNCPQRGYVTEHLDDAMLNNGDVDIYLCGPPPMVNAVATALRERG
ISPAGFWYEKFIASQSAAA

Sequences:

>Translated_339_residues
MMSFTIALNFEDGITRFIQCNQGEKVLDAAYRQKVNLPMDCSDGVCGTCKCHCASGEYALGEDYLEDALSEDEALARQVL
TCQMIPTSDCVIDIPVAAAQCKTAITTTDAEVVQVTMLSDTAIELVVQLDEPLTFLPGQYINIQVPGTPQVRAYSFSSLA
GSREGRFLIRNVPGGMMSQWLTQRAQPGDRLSLSGPMGSFYLRSGERPLLMLAGGTGLAPLLSMLETLQAKGSTRPVTLL
YGVTLDCDLVKTQELDAFARQLSQFRWLPVVSDAQSNCPQRGYVTEHLDDAMLNNGDVDIYLCGPPPMVNAVATALRERG
ISPAGFWYEKFIASQSAAA
>Mature_339_residues
MMSFTIALNFEDGITRFIQCNQGEKVLDAAYRQKVNLPMDCSDGVCGTCKCHCASGEYALGEDYLEDALSEDEALARQVL
TCQMIPTSDCVIDIPVAAAQCKTAITTTDAEVVQVTMLSDTAIELVVQLDEPLTFLPGQYINIQVPGTPQVRAYSFSSLA
GSREGRFLIRNVPGGMMSQWLTQRAQPGDRLSLSGPMGSFYLRSGERPLLMLAGGTGLAPLLSMLETLQAKGSTRPVTLL
YGVTLDCDLVKTQELDAFARQLSQFRWLPVVSDAQSNCPQRGYVTEHLDDAMLNNGDVDIYLCGPPPMVNAVATALRERG
ISPAGFWYEKFIASQSAAA

Specific function: Electron transfer component of benzoate 1,2-dioxygenase system [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787098, Length=211, Percent_Identity=29.8578199052133, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788903, Length=210, Percent_Identity=26.1904761904762, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787658, Length=86, Percent_Identity=45.3488372093023, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322146, Length=197, Percent_Identity=32.48730964467, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321673, Length=227, Percent_Identity=28.1938325991189, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 36790; Mature: 36790

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFTIALNFEDGITRFIQCNQGEKVLDAAYRQKVNLPMDCSDGVCGTCKCHCASGEYAL
CEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
GEDYLEDALSEDEALARQVLTCQMIPTSDCVIDIPVAAAQCKTAITTTDAEVVQVTMLSD
CHHHHHHHHCHHHHHHHHHHEEEECCCCCCEEECCCHHHHHCCEEEECCCEEEEEEEECC
TAIELVVQLDEPLTFLPGQYINIQVPGTPQVRAYSFSSLAGSREGRFLIRNVPGGMMSQW
CEEEEEEECCCCCEECCCCEEEEEECCCCCEEEEEHHHHCCCCCCCEEEEECCCHHHHHH
LTQRAQPGDRLSLSGPMGSFYLRSGERPLLMLAGGTGLAPLLSMLETLQAKGSTRPVTLL
HHHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEE
YGVTLDCDLVKTQELDAFARQLSQFRWLPVVSDAQSNCPQRGYVTEHLDDAMLNNGDVDI
EEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCHHHHHHHHHHCCCCEEE
YLCGPPPMVNAVATALRERGISPAGFWYEKFIASQSAAA
EEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMSFTIALNFEDGITRFIQCNQGEKVLDAAYRQKVNLPMDCSDGVCGTCKCHCASGEYAL
CEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
GEDYLEDALSEDEALARQVLTCQMIPTSDCVIDIPVAAAQCKTAITTTDAEVVQVTMLSD
CHHHHHHHHCHHHHHHHHHHEEEECCCCCCEEECCCHHHHHCCEEEECCCEEEEEEEECC
TAIELVVQLDEPLTFLPGQYINIQVPGTPQVRAYSFSSLAGSREGRFLIRNVPGGMMSQW
CEEEEEEECCCCCEECCCCEEEEEECCCCCEEEEEHHHHCCCCCCCEEEEECCCHHHHHH
LTQRAQPGDRLSLSGPMGSFYLRSGERPLLMLAGGTGLAPLLSMLETLQAKGSTRPVTLL
HHHHCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEE
YGVTLDCDLVKTQELDAFARQLSQFRWLPVVSDAQSNCPQRGYVTEHLDDAMLNNGDVDI
EEEEEECCCHHHHHHHHHHHHHHHCCCCCEECCHHHCCCCCCCHHHHHHHHHHCCCCEEE
YLCGPPPMVNAVATALRERGISPAGFWYEKFIASQSAAA
EEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1885518 [H]