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The map label for this gene is ydhA [H]

Identifier: 218548765

GI number: 218548765

Start: 1443471

End: 1443848

Strand: Direct

Name: ydhA [H]

Synonym: EFER_1404

Alternate gene names: 218548765

Gene position: 1443471-1443848 (Clockwise)

Preceding gene: 218548764

Following gene: 218548766

Centisome position: 31.46

GC content: 43.65

Gene sequence:

>378_bases
ATGTTAGGGAGGGCGTTTTGCCCTCCGGACCAGGAAAGTCTTCAGGATGCTGCTATGAAAAAACTGTTACTCCTTTGCTT
ACCGCTGATTCTTACAGGCTGTAGTGCTTTTAATCAGTTTGTTGAGACGTTGCAAACCGAGACGCTGGAATACCAGTGTG
ATGAAAAACCGTTGACAGTAAAACTGAATAATCCTCGCCAGGTGGTGAGTTTTGTCTACGATAATAAATTGCTTAATCTG
AAACAGGGAATTTCAGCTTCAGGGACGCGTTATAGCGATGGAATTTATGTTTTCTGGTCGAAGGGTAACGAGGCGACGGT
CTATAAACGTGACCGTATCGTCTTGAATAACTGCCAGTTACAAAATAACCAGCGTTGA

Upstream 100 bases:

>100_bases
GCCAGTGAGGCGACAGTGCTTGGCGCAATTTTTCCAGCTAATCCCCCGCGAACTCAGAGTTAACTGAATTTTTCTTAGTC
ATACTGCCGTTACACTAGGA

Downstream 100 bases:

>100_bases
GATTTTTCCAGGGGCGGCGCACAATAGCGTCACCCACTGACAATGAAAATCGAACGTATGTCTGATAACGATGAACTGCA
GCAAATTGCTCATTTGCGCC

Product: lysozyme inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLGRAFCPPDQESLQDAAMKKLLLLCLPLILTGCSAFNQFVETLQTETLEYQCDEKPLTVKLNNPRQVVSFVYDNKLLNL
KQGISASGTRYSDGIYVFWSKGNEATVYKRDRIVLNNCQLQNNQR

Sequences:

>Translated_125_residues
MLGRAFCPPDQESLQDAAMKKLLLLCLPLILTGCSAFNQFVETLQTETLEYQCDEKPLTVKLNNPRQVVSFVYDNKLLNL
KQGISASGTRYSDGIYVFWSKGNEATVYKRDRIVLNNCQLQNNQR
>Mature_125_residues
MLGRAFCPPDQESLQDAAMKKLLLLCLPLILTGCSAFNQFVETLQTETLEYQCDEKPLTVKLNNPRQVVSFVYDNKLLNL
KQGISASGTRYSDGIYVFWSKGNEATVYKRDRIVLNNCQLQNNQR

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081949, Length=108, Percent_Identity=83.3333333333333, Blast_Score=177, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 14239; Mature: 14239

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRAFCPPDQESLQDAAMKKLLLLCLPLILTGCSAFNQFVETLQTETLEYQCDEKPLTV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE
KLNNPRQVVSFVYDNKLLNLKQGISASGTRYSDGIYVFWSKGNEATVYKRDRIVLNNCQL
EECCHHHHHHHHHCCCCCCHHCCCCCCCCEECCCEEEEECCCCEEEEEECCEEEEECCCC
QNNQR
CCCCC
>Mature Secondary Structure
MLGRAFCPPDQESLQDAAMKKLLLLCLPLILTGCSAFNQFVETLQTETLEYQCDEKPLTV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE
KLNNPRQVVSFVYDNKLLNLKQGISASGTRYSDGIYVFWSKGNEATVYKRDRIVLNNCQL
EECCHHHHHHHHHCCCCCCHHCCCCCCCCEECCCEEEEECCCCEEEEEECCEEEEECCCC
QNNQR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1356963 [H]