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The map label for this gene is cdgR [H]

Identifier: 218548720

GI number: 218548720

Start: 1391365

End: 1392120

Strand: Direct

Name: cdgR [H]

Synonym: EFER_1357

Alternate gene names: 218548720

Gene position: 1391365-1392120 (Clockwise)

Preceding gene: 218548719

Following gene: 218548721

Centisome position: 30.32

GC content: 40.74

Gene sequence:

>756_bases
TTGGTACAGGGCGGGAAAAGGTGTTTTGTCTTCAAGGGATATAACATGAAGATTTCGTTGGATAATAATTATCATTCTGA
ACTTTATTTTCTCCCCGCACGGAATTATCAAAATAAACTGATCGGTTTAACCGTTTTTACCAATTTTGTCTCTGATGATG
GGCAAGTGCGCATCCCTACGGAACTGGTGATACCGCGCATGTCGGGTGAACAGCAATATCGCCTTTTTAAGGAGCAACTG
GACGTCATCGAACGTTGTCAGCATTTTTTTATGCAGCATAATTTGTTGGCATGGGTTTATTTATCGGCGCCAATAGCTGA
ATCGTTATTAAATGATGATGAAACTCTGATGCGTATTTTACGCTTGTCATTCATTGAATTGTTGATAAACGAAAATGATG
TAGAAATCGCCAGAGGCGTGATAAATCCGAGTCTGATCGCTCTTTCTCACCAATTTGCATTAGTGCTGGCAAACTTCGGT
GCTGGTGAGTTATCGACAAAAGCGATCTTCGAAGACCTGTTTAAACGCGTAATTTTTGATAAGTCATTTGTTCACAAACA
ATCGTCTCGTTTATCTTTTGAGCCTTTTATACGCGCTATTATTGCGCAGATATCTGTACACACTGAATCATTAATGGTCT
GTGGCATTGACTCAGATAAATTATTTCAGCAAGTAATGCCTTTTCATTTCTTTGCAATGCAAGGTGGTTTGTGGCCCGCG
GTCGCGACGAAGCACGTTACCACGTTGGTACAGTAG

Upstream 100 bases:

>100_bases
TAATAAGAATAAGCTGAATTAAAGGATCTGCCGCTGCGGTTAAAATGGAACACATGAATACATCCCCCTTAATAATTGCA
GTTGCATACCTGAATGTTCT

Downstream 100 bases:

>100_bases
TAATCCTCCTGTTTGTGGGTATTTAAGAGAGCATTTCCCCTCTACACTATCAGACAGGAGGAGCTATGACCCTGTCTTTT
ACCACGCGCTGGCGTGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: c-diGMP regulator [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MVQGGKRCFVFKGYNMKISLDNNYHSELYFLPARNYQNKLIGLTVFTNFVSDDGQVRIPTELVIPRMSGEQQYRLFKEQL
DVIERCQHFFMQHNLLAWVYLSAPIAESLLNDDETLMRILRLSFIELLINENDVEIARGVINPSLIALSHQFALVLANFG
AGELSTKAIFEDLFKRVIFDKSFVHKQSSRLSFEPFIRAIIAQISVHTESLMVCGIDSDKLFQQVMPFHFFAMQGGLWPA
VATKHVTTLVQ

Sequences:

>Translated_251_residues
MVQGGKRCFVFKGYNMKISLDNNYHSELYFLPARNYQNKLIGLTVFTNFVSDDGQVRIPTELVIPRMSGEQQYRLFKEQL
DVIERCQHFFMQHNLLAWVYLSAPIAESLLNDDETLMRILRLSFIELLINENDVEIARGVINPSLIALSHQFALVLANFG
AGELSTKAIFEDLFKRVIFDKSFVHKQSSRLSFEPFIRAIIAQISVHTESLMVCGIDSDKLFQQVMPFHFFAMQGGLWPA
VATKHVTTLVQ
>Mature_251_residues
MVQGGKRCFVFKGYNMKISLDNNYHSELYFLPARNYQNKLIGLTVFTNFVSDDGQVRIPTELVIPRMSGEQQYRLFKEQL
DVIERCQHFFMQHNLLAWVYLSAPIAESLLNDDETLMRILRLSFIELLINENDVEIARGVINPSLIALSHQFALVLANFG
AGELSTKAIFEDLFKRVIFDKSFVHKQSSRLSFEPFIRAIIAQISVHTESLMVCGIDSDKLFQQVMPFHFFAMQGGLWPA
VATKHVTTLVQ

Specific function: Required for resistance to host phagocyte oxidase [H]

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=236, Percent_Identity=49.5762711864407, Blast_Score=238, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 28799; Mature: 28799

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQGGKRCFVFKGYNMKISLDNNYHSELYFLPARNYQNKLIGLTVFTNFVSDDGQVRIPT
CCCCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCCCEEEHEEEEHHHCCCCCEEECH
ELVIPRMSGEQQYRLFKEQLDVIERCQHFFMQHNLLAWVYLSAPIAESLLNDDETLMRIL
HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHCCHHHHHHHH
RLSFIELLINENDVEIARGVINPSLIALSHQFALVLANFGAGELSTKAIFEDLFKRVIFD
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH
KSFVHKQSSRLSFEPFIRAIIAQISVHTESLMVCGIDSDKLFQQVMPFHFFAMQGGLWPA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHH
VATKHVTTLVQ
HHHHHHHHHCC
>Mature Secondary Structure
MVQGGKRCFVFKGYNMKISLDNNYHSELYFLPARNYQNKLIGLTVFTNFVSDDGQVRIPT
CCCCCCEEEEEECCEEEEEECCCCCCEEEEEECCCCCCCEEEHEEEEHHHCCCCCEEECH
ELVIPRMSGEQQYRLFKEQLDVIERCQHFFMQHNLLAWVYLSAPIAESLLNDDETLMRIL
HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHCCHHHHHHHH
RLSFIELLINENDVEIARGVINPSLIALSHQFALVLANFGAGELSTKAIFEDLFKRVIFD
HHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH
KSFVHKQSSRLSFEPFIRAIIAQISVHTESLMVCGIDSDKLFQQVMPFHFFAMQGGLWPA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHH
VATKHVTTLVQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA