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The map label for this gene is ydiY [H]

Identifier: 218548709

GI number: 218548709

Start: 1380221

End: 1380979

Strand: Direct

Name: ydiY [H]

Synonym: EFER_1346

Alternate gene names: 218548709

Gene position: 1380221-1380979 (Clockwise)

Preceding gene: 218548705

Following gene: 218548710

Centisome position: 30.08

GC content: 48.48

Gene sequence:

>759_bases
ATGAAGCTCTTGAAGACAGTTCCTGCCGCAGTTGTGCTGGCGGGGGGCGTGCTTGCGTCAATGTATGCGGCTGCCGATGA
TTCCGTTTTTACTGTCATGGATGATCCTGCGACTGCGCAGAAAACGTTTGAAGGTAATCTCAACGGGGGATACCTAGCGC
AGTCAGGAAATACCAAAAGTTCCTCTCTGACAGCCGACTCCACCATGACCTGGTATGGTAAGACAACAGCGTGGTCTTTA
TGGGGTAACGCCAGCAACACTTCGTCAAATGATGAGCGTTCTTCAGAAAAATATGCAGTAGGTGGACGTTCTCGTTATAA
CTTAACGGATTACGATTATATTTTCGGCCAGGCAAGTTGGCTGACAGACCGTTATAACGGTTATCGTGAACGCGATGTAC
TAACGGCGGGTTATGGACGGCAGTTCCTGAACGGCCCGGTTCATAGTTTTCGTTTTGAATTCGGTCCTGGTGTGCGTTAC
GACAAATATACAGATGATTCCAGCGAAACACAGCCGCTGGGTTACGCATCAGGTGCTTATGCATGGCAATTAACAGATAA
CGCGAAATTCACGCAAGGTATTTCTGTTTTTGGCGCGGAAGATACTACGCTCAATTCTGAGAGCGCGTTGAATGTGGCTA
TTAATGAACACTTTGGACTGAAAGTCGCCTACAACGTGACCTGGAACTCTGAACCGCCAGAATCAGCACCGGAGCATACC
GACCGCCGCACAGTGGTGTCGTTAGGATATAAAATGTAA

Upstream 100 bases:

>100_bases
TTATAATTCATCCCCTTTCCAGGGGGCGTTTGTCATTGATCCCTATGAAAGTTTCCGGGACCGTTATGGTCTCTTTTTTT
GTTGTGCGGACTCTTAATAA

Downstream 100 bases:

>100_bases
TGATATTGGGGTCAGATGCAATAAAAAGAGTCTGGCCCATATTATTTCTCTGAAAAAATCGATTATCGGAAATAAATTCC
ACTATTAGCTCCAAATCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKLLKTVPAAVVLAGGVLASMYAAADDSVFTVMDDPATAQKTFEGNLNGGYLAQSGNTKSSSLTADSTMTWYGKTTAWSL
WGNASNTSSNDERSSEKYAVGGRSRYNLTDYDYIFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDDSSETQPLGYASGAYAWQLTDNAKFTQGISVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
DRRTVVSLGYKM

Sequences:

>Translated_252_residues
MKLLKTVPAAVVLAGGVLASMYAAADDSVFTVMDDPATAQKTFEGNLNGGYLAQSGNTKSSSLTADSTMTWYGKTTAWSL
WGNASNTSSNDERSSEKYAVGGRSRYNLTDYDYIFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDDSSETQPLGYASGAYAWQLTDNAKFTQGISVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
DRRTVVSLGYKM
>Mature_252_residues
MKLLKTVPAAVVLAGGVLASMYAAADDSVFTVMDDPATAQKTFEGNLNGGYLAQSGNTKSSSLTADSTMTWYGKTTAWSL
WGNASNTSSNDERSSEKYAVGGRSRYNLTDYDYIFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DKYTDDSSETQPLGYASGAYAWQLTDNAKFTQGISVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
DRRTVVSLGYKM

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=91.6666666666667, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27615; Mature: 27615

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKTVPAAVVLAGGVLASMYAAADDSVFTVMDDPATAQKTFEGNLNGGYLAQSGNTKS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEECCCCCCCEEEECCCCCC
SSLTADSTMTWYGKTTAWSLWGNASNTSSNDERSSEKYAVGGRSRYNLTDYDYIFGQASW
CEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHEECCHHH
LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDDSSETQPLGYASGAY
HHHHHCCCCCCCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQLTDNAKFTQGISVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTVVSLGYKM
CCCEEEECCCCC
>Mature Secondary Structure
MKLLKTVPAAVVLAGGVLASMYAAADDSVFTVMDDPATAQKTFEGNLNGGYLAQSGNTKS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHEECCCCCCCEEEECCCCCC
SSLTADSTMTWYGKTTAWSLWGNASNTSSNDERSSEKYAVGGRSRYNLTDYDYIFGQASW
CEEECCCEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHEECCHHH
LTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDDSSETQPLGYASGAY
HHHHHCCCCCCCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
AWQLTDNAKFTQGISVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTVVSLGYKM
CCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]