Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is chbG
Identifier: 218548698
GI number: 218548698
Start: 1370419
End: 1371177
Strand: Direct
Name: chbG
Synonym: EFER_1334
Alternate gene names: 218548698
Gene position: 1370419-1371177 (Clockwise)
Preceding gene: 218548697
Following gene: 218548700
Centisome position: 29.87
GC content: 51.25
Gene sequence:
>759_bases ATGGAACGCTTACTGATTGTTAATGCCGATGACTTTGGTTTAAGTAAAGGTCAGAACTACGGCATTATCGAAGCCTGTCG TAACGGCGTTGTTACCTCTACGACGGCGTTGGTGAATGGTGAAGCTATTGATCACGCCGCACAGCTGAGCCGTGGGGCGC CAGGCCTGGCGGTGGGAATGCACTTTGTCCTCACCATGGGTAAGCCGCTGACTGAGATGCCGGGGCTGACCAGAGAAGGG ATGCTGGGGAAATGGATCTGGCAGATGGCGGAAGAAGGTGCTTTACCGCTGGAGGAGATTTCCCTGGAGCTGGCGAGTCA GTATCAGCGTTTCATTGAGCTTTTTGGGCGTAAACCGACCCATATTGATAGCCATCATCATGTGCATATGTTCCCGCAAA TTTTTCCGATTGTGGCCAGTTTTGCGGCAGAGCAGGGGATTGCACTGCGCATTGATCGTCAGGCGGTGTTTAATGACAGC GACCTGCCTGGAGAGTTGCGTAGTTCGCAGGGATTCAGTAGCGCATTTTATGGTGAAGAGATCAGTAATGCGTTGTTCCT GAAAGTGCTGGATGACTCCAGTCATCGCGGTGAGCGCTCTCTGGAAGTGATGTGTCATCCTGCGTTTATCGATAATACGA TTCGCCAGAGTGCTTATTGCTTCCCTCGGTTAACGGAACTGGATGTGCTGACCTCAGCGTCGTTGAAATATGCGATTGCT GAGCGTGGTTATCGGTTGGGTAGTTATCTTGATGTGTAA
Upstream 100 bases:
>100_bases GGTGCTGGCACGCGAGATGATTCTGGCACATGAGAAGTGGTTGCCAAACTTTGCTGACTGCATAGCAGATCTCAAAAAAG CACACTAAACGAGGCTGATT
Downstream 100 bases:
>100_bases GTAAGGTGGTAAGGTCACTCCCTTGGGGGCGTGACCTTATCCATATTTACGCAGGAATTTTGTCAATCTTAGGAATACGT GACCAGACGCGGTGTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MERLLIVNADDFGLSKGQNYGIIEACRNGVVTSTTALVNGEAIDHAAQLSRGAPGLAVGMHFVLTMGKPLTEMPGLTREG MLGKWIWQMAEEGALPLEEISLELASQYQRFIELFGRKPTHIDSHHHVHMFPQIFPIVASFAAEQGIALRIDRQAVFNDS DLPGELRSSQGFSSAFYGEEISNALFLKVLDDSSHRGERSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKYAIA ERGYRLGSYLDV
Sequences:
>Translated_252_residues MERLLIVNADDFGLSKGQNYGIIEACRNGVVTSTTALVNGEAIDHAAQLSRGAPGLAVGMHFVLTMGKPLTEMPGLTREG MLGKWIWQMAEEGALPLEEISLELASQYQRFIELFGRKPTHIDSHHHVHMFPQIFPIVASFAAEQGIALRIDRQAVFNDS DLPGELRSSQGFSSAFYGEEISNALFLKVLDDSSHRGERSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKYAIA ERGYRLGSYLDV >Mature_252_residues MERLLIVNADDFGLSKGQNYGIIEACRNGVVTSTTALVNGEAIDHAAQLSRGAPGLAVGMHFVLTMGKPLTEMPGLTREG MLGKWIWQMAEEGALPLEEISLELASQYQRFIELFGRKPTHIDSHHHVHMFPQIFPIVASFAAEQGIALRIDRQAVFNDS DLPGELRSSQGFSSAFYGEEISNALFLKVLDDSSHRGERSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKYAIA ERGYRLGSYLDV
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0249 family
Homologues:
Organism=Homo sapiens, GI63054868, Length=302, Percent_Identity=29.8013245033113, Blast_Score=92, Evalue=5e-19, Organism=Escherichia coli, GI1788028, Length=252, Percent_Identity=85.3174603174603, Blast_Score=449, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHBG_ESCF3 (B7LQ59)
Other databases:
- EMBL: CU928158 - RefSeq: YP_002382489.1 - EnsemblBacteria: EBESCT00000124748 - GeneID: 7120883 - GenomeReviews: CU928158_GR - KEGG: efe:EFER_1334 - GeneTree: EBGT00050000011798 - HOGENOM: HBG716502 - ProtClustDB: PRK02134 - BioCyc: EFER585054:EFER_1334-MONOMER - HAMAP: MF_01246 - InterPro: IPR002509 - InterPro: IPR006879 - InterPro: IPR022948 - Gene3D: G3DSA:3.20.20.370
Pfam domain/function: PF04794 YdjC
EC number: NA
Molecular weight: Translated: 27890; Mature: 27890
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLLIVNADDFGLSKGQNYGIIEACRNGVVTSTTALVNGEAIDHAAQLSRGAPGLAVGM CCCEEEEECCCCCCCCCCCCCHHHHHHCCCEEEHEEEECCHHHHHHHHHHCCCCCHHHHH HFVLTMGKPLTEMPGLTREGMLGKWIWQMAEEGALPLEEISLELASQYQRFIELFGRKPT HHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC HIDSHHHVHMFPQIFPIVASFAAEQGIALRIDRQAVFNDSDLPGELRSSQGFSSAFYGEE CCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCHHHCCCCCCHHHHHHH ISNALFLKVLDDSSHRGERSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKYAIA HCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ERGYRLGSYLDV HCCCCCCCCCCC >Mature Secondary Structure MERLLIVNADDFGLSKGQNYGIIEACRNGVVTSTTALVNGEAIDHAAQLSRGAPGLAVGM CCCEEEEECCCCCCCCCCCCCHHHHHHCCCEEEHEEEECCHHHHHHHHHHCCCCCHHHHH HFVLTMGKPLTEMPGLTREGMLGKWIWQMAEEGALPLEEISLELASQYQRFIELFGRKPT HHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC HIDSHHHVHMFPQIFPIVASFAAEQGIALRIDRQAVFNDSDLPGELRSSQGFSSAFYGEE CCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECHHHCCCCCCCCHHHCCCCCCHHHHHHH ISNALFLKVLDDSSHRGERSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKYAIA HCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ERGYRLGSYLDV HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA