Click here to switch to the map view.

The map label for this gene is yobF [H]

Identifier: 218548617

GI number: 218548617

Start: 1290945

End: 1291088

Strand: Direct

Name: yobF [H]

Synonym: EFER_1251

Alternate gene names: 218548617

Gene position: 1290945-1291088 (Clockwise)

Preceding gene: 218548616

Following gene: 218548618

Centisome position: 28.13

GC content: 40.97

Gene sequence:

>144_bases
ATGTGTGGCATTTTCAGTAAAGAAGTCCAGAGTAAACACGTTGACGTTGAATACCGCTTCTCTGCCGAACCTTATATTAG
TGCCTCATGCAGTAATGTCTCAGTTTTATCTATGTTAAGCCTGCGGGCGAAGAATATACTCTAA

Upstream 100 bases:

>100_bases
GAATTTGTGCGGCTGATCGAGACACGTTTAAAAATGGCTTGCCATAATTAACGTTGTATGTGATAACACGTTTTGGGTTA
AACGAGGTACAGTTCTGTTT

Downstream 100 bases:

>100_bases
GGAATTTTGCAAATGGCAAAGATTAAAGGTCAAGTTAAGTGGTTCAACGAGTCAAAAGGTTTTGGCTTCATTACTCCGGC
AGATGGTAGCAAAGACGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MCGIFSKEVQSKHVDVEYRFSAEPYISASCSNVSVLSMLSLRAKNIL

Sequences:

>Translated_47_residues
MCGIFSKEVQSKHVDVEYRFSAEPYISASCSNVSVLSMLSLRAKNIL
>Mature_47_residues
MCGIFSKEVQSKHVDVEYRFSAEPYISASCSNVSVLSMLSLRAKNIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788127, Length=47, Percent_Identity=87.2340425531915, Blast_Score=85, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019672 [H]

Pfam domain/function: PF10736 DUF2527 [H]

EC number: NA

Molecular weight: Translated: 5239; Mature: 5239

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGIFSKEVQSKHVDVEYRFSAEPYISASCSNVSVLSMLSLRAKNIL
CCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MCGIFSKEVQSKHVDVEYRFSAEPYISASCSNVSVLSMLSLRAKNIL
CCCCCCCCCCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]