Click here to switch to the map view.

The map label for this gene is fliS [H]

Identifier: 218548538

GI number: 218548538

Start: 1208987

End: 1209397

Strand: Reverse

Name: fliS [H]

Synonym: EFER_1168

Alternate gene names: 218548538

Gene position: 1209397-1208987 (Counterclockwise)

Preceding gene: 218548539

Following gene: 218548537

Centisome position: 26.36

GC content: 50.85

Gene sequence:

>411_bases
ATGTCTACCGCGAGCGGTATCCAAGCGTATGCGCAAGTCGGTGTGGAAAGTGGCGTGATGAGCGCCAGTCCACATCAGTT
GATCGAGATGTTATTTGATGGTGCCCACAGCGCCCTGGTGCGCGCTCGCCTGTTTATGCAGCAAGGCGAAATTGTGGCGA
AAGGTGAAGCCCTCAGTAAGGCCATCAATATTATTGATAATGGATTAAAAGCGGGTCTGGACGAGGAGAAAGGGGGTGAA
CTCGCGCGTAATCTTTCCAGTCTCTATGACTATATGATTCGCCGCCTGCTACAGGCCAATGTGCGTAATGACGTCCAGGC
CATTGAAGAAGTTGAAGGGTTATTGGGCAATATTGCCGATGCCTGGAAACAGATTTCGCCAAAAGGCGTTTCCCAGGAGT
TACGTGAATGA

Upstream 100 bases:

>100_bases
TACCCAGCTCGATACCATGATGAGCAAACTGAATAACACCAGCACTTACTTAACCCAACAATTTGAAGCTATGAGCAGCT
AATCAAAACATGAGGTAACT

Downstream 100 bases:

>100_bases
CCTCACCCGTGGAGTTTATTAGCCGTTGGCAGCGAGTGGCGCTGCTAAGCCAGTCGTTGCTGGAGCTTGCTGAACGTGGT
GAATGGAACCTGCTTCTGGA

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSTASGIQAYAQVGVESGVMSASPHQLIEMLFDGAHSALVRARLFMQQGEIVAKGEALSKAINIIDNGLKAGLDEEKGGE
LARNLSSLYDYMIRRLLQANVRNDVQAIEEVEGLLGNIADAWKQISPKGVSQELRE

Sequences:

>Translated_136_residues
MSTASGIQAYAQVGVESGVMSASPHQLIEMLFDGAHSALVRARLFMQQGEIVAKGEALSKAINIIDNGLKAGLDEEKGGE
LARNLSSLYDYMIRRLLQANVRNDVQAIEEVEGLLGNIADAWKQISPKGVSQELRE
>Mature_135_residues
STASGIQAYAQVGVESGVMSASPHQLIEMLFDGAHSALVRARLFMQQGEIVAKGEALSKAINIIDNGLKAGLDEEKGGEL
ARNLSSLYDYMIRRLLQANVRNDVQAIEEVEGLLGNIADAWKQISPKGVSQELRE

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=129, Percent_Identity=65.8914728682171, Blast_Score=169, Evalue=9e-44,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14712; Mature: 14581

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTASGIQAYAQVGVESGVMSASPHQLIEMLFDGAHSALVRARLFMQQGEIVAKGEALSK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AINIIDNGLKAGLDEEKGGELARNLSSLYDYMIRRLLQANVRNDVQAIEEVEGLLGNIAD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWKQISPKGVSQELRE
HHHHCCCCCHHHHHCC
>Mature Secondary Structure 
STASGIQAYAQVGVESGVMSASPHQLIEMLFDGAHSALVRARLFMQQGEIVAKGEALSK
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AINIIDNGLKAGLDEEKGGELARNLSSLYDYMIRRLLQANVRNDVQAIEEVEGLLGNIAD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWKQISPKGVSQELRE
HHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]