| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yecG [H]
Identifier: 218548499
GI number: 218548499
Start: 1169672
End: 1170100
Strand: Reverse
Name: yecG [H]
Synonym: EFER_1128
Alternate gene names: 218548499
Gene position: 1170100-1169672 (Counterclockwise)
Preceding gene: 218548510
Following gene: 218548493
Centisome position: 25.5
GC content: 48.02
Gene sequence:
>429_bases ATGGCATATACCAATATACTTGTGGCTGTCGCTGTAACACCGGAAAGTCAACAATTGCTGGCCAAAGCAGTTTCTATTGC GCGGCCACTTAATGGTCGCGTGAGTTTGATTACGCTGGCTTCTGATCCAGAAATGTATAACCAGTTTGCCGCCCCGATGC TGGAGGATTTACGTGAAGTCATGCAGGAAGAGATTTACGATTTCTTTCGCCAGCTGGAGCAAGAAGCGGGTTATCCCATT GCACAAAGTTTTATTGCCTATGGCGAAATGAGCGAGCACATTCTGGCGATGTGTCGCAAGCATAAGTTTGATCTGGTGAT TTGCGGTAATCATAACCACAGCTTCTTTTCGCGAGCATCCTGCTCAGCGAAAAGTGTTATTGGCTCCAGCGAAGTGGATG TGCTCCTGGTGCCGCTTTCCGGGAGTTAA
Upstream 100 bases:
>100_bases CATGATGACCTTCACACTATTGAGAAAGTTAAATATTGCACTATGCTGCGAAAGCGTGTAGTGCTGAACTAAAACTGAAC AATCGCTATAGGGAAATAAC
Downstream 100 bases:
>100_bases TCCTGCTCAGGCCAGCTTAGGAAAGGTCGCCACGTTATTGCGCTGCTGGCTTTCCGCGCTTCGTGGCGCGACTTCCTTTA GGTCACGAATAAAGCGTTCC
Product: universal stress protein UspC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAYTNILVAVAVTPESQQLLAKAVSIARPLNGRVSLITLASDPEMYNQFAAPMLEDLREVMQEEIYDFFRQLEQEAGYPI AQSFIAYGEMSEHILAMCRKHKFDLVICGNHNHSFFSRASCSAKSVIGSSEVDVLLVPLSGS
Sequences:
>Translated_142_residues MAYTNILVAVAVTPESQQLLAKAVSIARPLNGRVSLITLASDPEMYNQFAAPMLEDLREVMQEEIYDFFRQLEQEAGYPI AQSFIAYGEMSEHILAMCRKHKFDLVICGNHNHSFFSRASCSAKSVIGSSEVDVLLVPLSGS >Mature_141_residues AYTNILVAVAVTPESQQLLAKAVSIARPLNGRVSLITLASDPEMYNQFAAPMLEDLREVMQEEIYDFFRQLEQEAGYPIA QSFIAYGEMSEHILAMCRKHKFDLVICGNHNHSFFSRASCSAKSVIGSSEVDVLLVPLSGS
Specific function: Required for resistance to DNA-damaging agents [H]
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
Organism=Escherichia coli, GI1788205, Length=141, Percent_Identity=79.4326241134752, Blast_Score=238, Evalue=9e-65, Organism=Escherichia coli, GI1789909, Length=140, Percent_Identity=37.8571428571429, Blast_Score=106, Evalue=7e-25, Organism=Escherichia coli, GI1790358, Length=139, Percent_Identity=30.2158273381295, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15716; Mature: 15585
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTNILVAVAVTPESQQLLAKAVSIARPLNGRVSLITLASDPEMYNQFAAPMLEDLREV CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH MQEEIYDFFRQLEQEAGYPIAQSFIAYGEMSEHILAMCRKHKFDLVICGNHNHSFFSRAS HHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCC CSAKSVIGSSEVDVLLVPLSGS CCHHHHCCCCCCCEEEEECCCC >Mature Secondary Structure AYTNILVAVAVTPESQQLLAKAVSIARPLNGRVSLITLASDPEMYNQFAAPMLEDLREV CCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH MQEEIYDFFRQLEQEAGYPIAQSFIAYGEMSEHILAMCRKHKFDLVICGNHNHSFFSRAS HHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHCC CSAKSVIGSSEVDVLLVPLSGS CCHHHHCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]