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The map label for this gene is yccT

Identifier: 218548473

GI number: 218548473

Start: 1147233

End: 1147895

Strand: Reverse

Name: yccT

Synonym: EFER_1101

Alternate gene names: 218548473

Gene position: 1147895-1147233 (Counterclockwise)

Preceding gene: 218548475

Following gene: 218548472

Centisome position: 25.02

GC content: 47.66

Gene sequence:

>663_bases
ATGAAAGCCGGAACTCTCACTCTCCTCATTGCGCTCTGCTTACCGATATCCGTTTCTGCCACCACGTTACGTCTGAGCAG
TGAAGTCGATCTGCTGGTACTGGATGGCAAAAAGGTCTCCAGCTCTCTCTTGCGCGGTGCGGACAGTATTGAACTCGAAA
ATGGTCCACATCAGTTGGTATTTCGTGTCGAAAAAACAATTCAGATGCCCGGTCACGGAGAACGCCTCTACATCTCACCA
CCTCTGGTCGCCAGTTTTAATACTCAGCTAATAAGCCAGGTTAATTTTCGCCTACCCTCACTGCTCAATGAGCAGGAAAC
TGCGCATTTTGATGCCGCACCGCGTCTGGAACTGCTTGACGGCGATGCAATGCCCATACCGGTAAAACTGGATATTCTGG
CGATTACTTCAGTAGCTAAACCTATTGATTATGAAGGGGAAGTAGAGCGCTATAACAAATCAGCTAAACGCGCTTCGCTT
CCGCAGTTCGCTACGATGATGGCAGATGACAGTACATTGCTTTCTGGTGTTTCGGAACTGGATGCTATACCACCACAATC
ACAAGTCCTGACTGAGCAACGTTTAAAATATTGGTTTAAACAAGCGGACCCGCAAACACGTAACAACTTTCTGCAATGGG
CTGAAAAACAACCATCTTCCTGA

Upstream 100 bases:

>100_bases
TGAGAGCAAAATCGGAAAATATGTCTATATGTTAGTAAGTATGATTACCGAAAAATTTTGATACATTCTTCATTGGGCGC
TTATTGGACAGGAGTAAACT

Downstream 100 bases:

>100_bases
AAATTTTGTGCCTTCGCCCAGGCTTTTTTTGTCTTTCTCTTGCAGCATGAAGCCCTTGCAGTAATCTGTAGCAAAGCTAA
CTACGGATGTGAATTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKAGTLTLLIALCLPISVSATTLRLSSEVDLLVLDGKKVSSSLLRGADSIELENGPHQLVFRVEKTIQMPGHGERLYISP
PLVASFNTQLISQVNFRLPSLLNEQETAHFDAAPRLELLDGDAMPIPVKLDILAITSVAKPIDYEGEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKQADPQTRNNFLQWAEKQPSS

Sequences:

>Translated_220_residues
MKAGTLTLLIALCLPISVSATTLRLSSEVDLLVLDGKKVSSSLLRGADSIELENGPHQLVFRVEKTIQMPGHGERLYISP
PLVASFNTQLISQVNFRLPSLLNEQETAHFDAAPRLELLDGDAMPIPVKLDILAITSVAKPIDYEGEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKQADPQTRNNFLQWAEKQPSS
>Mature_220_residues
MKAGTLTLLIALCLPISVSATTLRLSSEVDLLVLDGKKVSSSLLRGADSIELENGPHQLVFRVEKTIQMPGHGERLYISP
PLVASFNTQLISQVNFRLPSLLNEQETAHFDAAPRLELLDGDAMPIPVKLDILAITSVAKPIDYEGEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKQADPQTRNNFLQWAEKQPSS

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=220, Percent_Identity=87.2727272727273, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCCT_ESCF3 (B7LNX4)

Other databases:

- EMBL:   CU928158
- RefSeq:   YP_002382264.1
- EnsemblBacteria:   EBESCT00000123878
- GeneID:   7123778
- GenomeReviews:   CU928158_GR
- KEGG:   efe:EFER_1101
- GeneTree:   EBGT00050000010368
- HOGENOM:   HBG473849
- ProtClustDB:   PRK03641
- BioCyc:   EFER585054:EFER_1101-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 24315; Mature: 24315

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGTLTLLIALCLPISVSATTLRLSSEVDLLVLDGKKVSSSLLRGADSIELENGPHQLV
CCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCHHHHHHHCCCCCEEECCCCHHEE
FRVEKTIQMPGHGERLYISPPLVASFNTQLISQVNFRLPSLLNEQETAHFDAAPRLELLD
EEEEHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEC
GDAMPIPVKLDILAITSVAKPIDYEGEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL
CCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHH
DAIPPQSQVLTEQRLKYWFKQADPQTRNNFLQWAEKQPSS
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKAGTLTLLIALCLPISVSATTLRLSSEVDLLVLDGKKVSSSLLRGADSIELENGPHQLV
CCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCHHHHHHHCCCCCEEECCCCHHEE
FRVEKTIQMPGHGERLYISPPLVASFNTQLISQVNFRLPSLLNEQETAHFDAAPRLELLD
EEEEHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEC
GDAMPIPVKLDILAITSVAKPIDYEGEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL
CCCCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHH
DAIPPQSQVLTEQRLKYWFKQADPQTRNNFLQWAEKQPSS
HCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA