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The map label for this gene is ssuA [H]

Identifier: 218548452

GI number: 218548452

Start: 1123286

End: 1124245

Strand: Reverse

Name: ssuA [H]

Synonym: EFER_1080

Alternate gene names: 218548452

Gene position: 1124245-1123286 (Counterclockwise)

Preceding gene: 218548453

Following gene: 218548451

Centisome position: 24.5

GC content: 52.08

Gene sequence:

>960_bases
ATGCGTAAGATCATTAAACTGGCGCTGGCGGGATTACTCAGCGTCTCCACACTTGCGATTGCCGCAGAGTCTTCGCCAGA
GGCGTTAAGGATTGGCTATCAGAAAAGCAATATCAGTTCGGTACTGGCGAAAAATTACCAAATGCTGGAAAAACGCTATC
CGCAAACAAAAATCTCCTGGGTGGAGTTCCCCGCGGGTCCGCAAATGTTGGAAGCGTTAAACGTTGGCAGTATTGATCTC
GGCAGTACCGGAGATATTCCGCCAATCTTTGCCCAGGCTGCCGGGGCTGATTTGGTATATGTGGGCGTCGAGCCGCCGAA
GCCCAAAGCCGAAGTGATTCTGGTGGCAGAAAACAGCCCGATCAAAACCGTAGCCGATCTTAAAGGTCACAAAGTTGCTT
TTCAGAAAGGTTCCAGTTCACACAACCTTTTACTGCGCGCACTACGCCAGGCCGGGCTTAAATTCACGGATATCCAGCCC
ACTTACCTGACGCCCGCCGATGCCCGCGCCGCGTTCCAGCAAGGTAACGTCGACGCCTGGGCTATCTGGGATCCCTACTA
CTCCGCTGCATTATTACAGGGCGGCGTGCGAGTGCTGAAAGATGGCACCGGTCTCAATCAAACAGGATCGTTTTATCTGG
CTGCCCGTCCGTATGCAGAAAAAAACGGCGCTTTTATTCAGGGCGTGCTGGCAACCTTTAGTGAGGCCGATGCGTTAACC
CGCAGTCAGCGTAAGCAAAGCATCCCTTTACTGGCAAAAACAATGGGTTTACCGGCACCGGTGATTGCCTCTTACTTAGA
TCATCGCCCTCCTACCACCATCAAACCGGTTAACGCCGATGTTGCCGCCTTACAGCAGCAAACGGCAGATCTGTTTTATG
AAAACCGTCTGGTACCGAAAAAAGTCGATATTCGCCAGCGCATCTGGCAGCCCTCTCAACTGGAAGGAAAACAATTATGA

Upstream 100 bases:

>100_bases
CTGCAAACCCGTCTTGATGCCGCGCTCGACACCTTCTGGCAGGCGCTGCACCGCCGCGATGTTCAGGTTCCCGATCTTCT
GTCTCTGCGAGGTAATGCCC

Downstream 100 bases:

>100_bases
GTCTGAATATGTTCTGGTTTTTACCGACCCACGGTGACGGGCATTATCTGGGAACGGAAGAAGGTTCACGTTCGGTTGAT
CACGGTTATCTGCAACAAAT

Product: alkanesulfonate transporter substrate-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRKIIKLALAGLLSVSTLAIAAESSPEALRIGYQKSNISSVLAKNYQMLEKRYPQTKISWVEFPAGPQMLEALNVGSIDL
GSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTGLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT
RSQRKQSIPLLAKTMGLPAPVIASYLDHRPPTTIKPVNADVAALQQQTADLFYENRLVPKKVDIRQRIWQPSQLEGKQL

Sequences:

>Translated_319_residues
MRKIIKLALAGLLSVSTLAIAAESSPEALRIGYQKSNISSVLAKNYQMLEKRYPQTKISWVEFPAGPQMLEALNVGSIDL
GSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTGLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT
RSQRKQSIPLLAKTMGLPAPVIASYLDHRPPTTIKPVNADVAALQQQTADLFYENRLVPKKVDIRQRIWQPSQLEGKQL
>Mature_319_residues
MRKIIKLALAGLLSVSTLAIAAESSPEALRIGYQKSNISSVLAKNYQMLEKRYPQTKISWVEFPAGPQMLEALNVGSIDL
GSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTGLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT
RSQRKQSIPLLAKTMGLPAPVIASYLDHRPPTTIKPVNADVAALQQQTADLFYENRLVPKKVDIRQRIWQPSQLEGKQL

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=319, Percent_Identity=94.6708463949843, Blast_Score=616, Evalue=1e-178,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168
- InterPro:   IPR001638 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 34618; Mature: 34618

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIIKLALAGLLSVSTLAIAAESSPEALRIGYQKSNISSVLAKNYQMLEKRYPQTKISW
CHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEE
VEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSP
EECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCC
IKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAW
CCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCEECCHHHHHHHHCCCCCEE
AIWDPYYSAALLQGGVRVLKDGTGLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT
EEECHHHHHHHHHCCHHEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
RSQRKQSIPLLAKTMGLPAPVIASYLDHRPPTTIKPVNADVAALQQQTADLFYENRLVPK
HHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
KVDIRQRIWQPSQLEGKQL
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRKIIKLALAGLLSVSTLAIAAESSPEALRIGYQKSNISSVLAKNYQMLEKRYPQTKISW
CHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEE
VEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSP
EECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCC
IKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAW
CCHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCCEECCHHHHHHHHCCCCCEE
AIWDPYYSAALLQGGVRVLKDGTGLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALT
EEECHHHHHHHHHCCHHEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
RSQRKQSIPLLAKTMGLPAPVIASYLDHRPPTTIKPVNADVAALQQQTADLFYENRLVPK
HHHHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
KVDIRQRIWQPSQLEGKQL
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]