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The map label for this gene is ybjX [H]

Identifier: 218548399

GI number: 218548399

Start: 1052140

End: 1053147

Strand: Reverse

Name: ybjX [H]

Synonym: EFER_1024

Alternate gene names: 218548399

Gene position: 1053147-1052140 (Counterclockwise)

Preceding gene: 218548400

Following gene: 218548397

Centisome position: 22.95

GC content: 47.42

Gene sequence:

>1008_bases
TTGGTTAAGTTTGTCAATGCTGGAATTGGGCTACGACTTTATATTGGATTGGTGAATATGTCGCAGCTAACTGAAAATAC
CTTTTCTCCTGGCAAATCTCTAAACAGTCGGACCCTTTTCTTCCGTCTGGCAAGCGGCGAATTGCGTCCTGGTAAATTTT
GGCATCGACGCAAATTCCGCCAAAAATTTTTGCTGCGGTCATTGCTTATGCCACGACTTAGCATTGAGTGGATGAATGAA
CTCTGCCAGATGCCGCATATTAACGCGTTACTGGTGCGCCAGCCACGGCTACCTGTTCGTCTCCATCGTCCCTATCTGAC
GGTGAGTTTTAACCGTCAACAATTGCTTGCGGCGTTGCGCTATCACTATGCCTTATTACGTAACGTAATGTCAGCCGAAG
AATTCAATTGCTATCTGAATACTCCAGGCCTGCAACTGGCGCAGCTGGAAGGCAAAAATGGCGAACGCTATACGCTGGAA
TTGACCATGATGATCTCTATGGACAAAGAAGGCGACAGTACGATCCTCCTGCGAAATGATGAAGGTATTCCGCTGGCAGA
AATCACGTTTACACTGTGTGAGTACCAGGGCAAAAGAACGCTGTTTATTGGTGGGCTGCAAGGCGCGAAACCAGAAATTC
CTCATCAGGCAATTCAGGATGCGACAAAAGCCTGCTCGGGGCTATTTCCTAAACGTCTGGTTCTGGAAGCTGCGTGTCGC
CTTGCGAATCGCCTGAGAGTTGAACAAATTCTCGCGGTCAGCAACGAAACACATATTTACCGCAGCCTGCGTTACCGGGA
TAAAGATGAAAAAATTCATGCTGATTACAATGCATTCTGGGCCGCGGTGGGCGGTGAGTGCGATAAACAGCATTTTTACC
ATATCCCGGCGAAAATACCGCGCAAAGATATGGCAGAAATAGCGAGCAAAAAACGTGCGGAATACCGTCGGCGCTATCTT
TTGCTCGATACCATTGAAGAACAGATGTCGATGCTATTTCATGCTTAA

Upstream 100 bases:

>100_bases
CTCCTGAATTCATCGTCGTTCTCACCTGTATGAACAGTAAAACTTCAACCAAACATCAACAAAACCACAAAGTCACGGTG
AGTAATCGCTTTATTGATTT

Downstream 100 bases:

>100_bases
TCTGCCCGGCCGCGTGCCAGCCATACCACCCTGGAGAACATTTTCTTAAACAATACTGGCACTGCATCAACACCACGTCG
TCCGGCTTCCATAGCCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MVKFVNAGIGLRLYIGLVNMSQLTENTFSPGKSLNSRTLFFRLASGELRPGKFWHRRKFRQKFLLRSLLMPRLSIEWMNE
LCQMPHINALLVRQPRLPVRLHRPYLTVSFNRQQLLAALRYHYALLRNVMSAEEFNCYLNTPGLQLAQLEGKNGERYTLE
LTMMISMDKEGDSTILLRNDEGIPLAEITFTLCEYQGKRTLFIGGLQGAKPEIPHQAIQDATKACSGLFPKRLVLEAACR
LANRLRVEQILAVSNETHIYRSLRYRDKDEKIHADYNAFWAAVGGECDKQHFYHIPAKIPRKDMAEIASKKRAEYRRRYL
LLDTIEEQMSMLFHA

Sequences:

>Translated_335_residues
MVKFVNAGIGLRLYIGLVNMSQLTENTFSPGKSLNSRTLFFRLASGELRPGKFWHRRKFRQKFLLRSLLMPRLSIEWMNE
LCQMPHINALLVRQPRLPVRLHRPYLTVSFNRQQLLAALRYHYALLRNVMSAEEFNCYLNTPGLQLAQLEGKNGERYTLE
LTMMISMDKEGDSTILLRNDEGIPLAEITFTLCEYQGKRTLFIGGLQGAKPEIPHQAIQDATKACSGLFPKRLVLEAACR
LANRLRVEQILAVSNETHIYRSLRYRDKDEKIHADYNAFWAAVGGECDKQHFYHIPAKIPRKDMAEIASKKRAEYRRRYL
LLDTIEEQMSMLFHA
>Mature_335_residues
MVKFVNAGIGLRLYIGLVNMSQLTENTFSPGKSLNSRTLFFRLASGELRPGKFWHRRKFRQKFLLRSLLMPRLSIEWMNE
LCQMPHINALLVRQPRLPVRLHRPYLTVSFNRQQLLAALRYHYALLRNVMSAEEFNCYLNTPGLQLAQLEGKNGERYTLE
LTMMISMDKEGDSTILLRNDEGIPLAEITFTLCEYQGKRTLFIGGLQGAKPEIPHQAIQDATKACSGLFPKRLVLEAACR
LANRLRVEQILAVSNETHIYRSLRYRDKDEKIHADYNAFWAAVGGECDKQHFYHIPAKIPRKDMAEIASKKRAEYRRRYL
LLDTIEEQMSMLFHA

Specific function: Unknown

COG id: COG2990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0461 [H]

Homologues:

Organism=Escherichia coli, GI1787103, Length=321, Percent_Identity=76.01246105919, Blast_Score=502, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007488 [H]

Pfam domain/function: PF04393 DUF535 [H]

EC number: NA

Molecular weight: Translated: 38863; Mature: 38863

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKFVNAGIGLRLYIGLVNMSQLTENTFSPGKSLNSRTLFFRLASGELRPGKFWHRRKFR
CEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
QKFLLRSLLMPRLSIEWMNELCQMPHINALLVRQPRLPVRLHRPYLTVSFNRQQLLAALR
HHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEECCEEEEEECHHHHHHHHH
YHYALLRNVMSAEEFNCYLNTPGLQLAQLEGKNGERYTLELTMMISMDKEGDSTILLRND
HHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCEEEEEEEEEEEECCCCCCEEEEECC
EGIPLAEITFTLCEYQGKRTLFIGGLQGAKPEIPHQAIQDATKACSGLFPKRLVLEAACR
CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LANRLRVEQILAVSNETHIYRSLRYRDKDEKIHADYNAFWAAVGGECDKQHFYHIPAKIP
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCEEECCCCCC
RKDMAEIASKKRAEYRRRYLLLDTIEEQMSMLFHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKFVNAGIGLRLYIGLVNMSQLTENTFSPGKSLNSRTLFFRLASGELRPGKFWHRRKFR
CEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
QKFLLRSLLMPRLSIEWMNELCQMPHINALLVRQPRLPVRLHRPYLTVSFNRQQLLAALR
HHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEECCEEEEEECHHHHHHHHH
YHYALLRNVMSAEEFNCYLNTPGLQLAQLEGKNGERYTLELTMMISMDKEGDSTILLRND
HHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCEEEEEEEEEEEECCCCCCEEEEECC
EGIPLAEITFTLCEYQGKRTLFIGGLQGAKPEIPHQAIQDATKACSGLFPKRLVLEAACR
CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
LANRLRVEQILAVSNETHIYRSLRYRDKDEKIHADYNAFWAAVGGECDKQHFYHIPAKIP
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCEEECCCCCC
RKDMAEIASKKRAEYRRRYLLLDTIEEQMSMLFHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]