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The map label for this gene is ybjT [H]

Identifier: 218548388

GI number: 218548388

Start: 1038970

End: 1040400

Strand: Reverse

Name: ybjT [H]

Synonym: EFER_1012

Alternate gene names: 218548388

Gene position: 1040400-1038970 (Counterclockwise)

Preceding gene: 218548389

Following gene: 218548387

Centisome position: 22.67

GC content: 54.86

Gene sequence:

>1431_bases
GTGCCGCAACGCATTTTAGTTCTCGGTGCCAGTGGCTATATTGGTCAGCATCTGGTGCACGCGCTCAGCCAACAAGGGCA
TCAGATCCTGGCGGCAGCACGTCACGTCGACAGGCTTGCAAAACTGCAACTGGCAAACGTCAGTTGCCATAAAGTCGATC
TCAGCTGGCCGGATAACCTTCCGGCCCTGTTGCAGAATATCGATACCGTCTATTTTCTGGTGCACAGCATGGGCGAAGGC
GGCGATTTTATCGCTCAGGAGCGCCAGGTGGCTCTTAACGTCCGCGATGCGCTGCGCGAAGCACCGGTTAAACAATTAAT
CTTTCTCAGTTCATTGCAGGCCCCGCCTCACGAGCAGTCGGACCATCTGCGCGCCCGTCAGGCTACGGCGGATATTCTTC
GTGAAGCGGGTGTTCCGGTGACCGAATTGCGTGCCGGAATTATCGTTGGCGCAGGTTCAGCGGCGTTCGAAGTCATGCGC
GATATGGTCTACAACCTGGCGGTGTTAACCCCGCCGCGTTGGGTTCGTTCACGCACCACGCCCATTGCACTGGAAAACCT
GCTGCATTATCTGGTGGCGTTACTGGACCATCCAGCCAGGGAACATCGCATTTTCGAAGCCGCCGGACCAGAGGTGCTCA
GTTATCAACAACAGTTTGAACATTTTATGGCGGTGAGCGGTAAGCACCGCTGGTTAATCCCCATCCCCTTTCCCACCCGT
TGGATCTCGGTGTGGTTTCTTAATGTGATTACCTCCGTACCGTCAACCACCGCCAAAGCGTTGATTCAGGGGCTGAAACA
TGATCTGCTGGCGGATGACACCGCGCTACGTGCACTCATCCCACAACGGCTGATCGCATTCGATGACGCGGTACGTCGCA
CCCTGAAAGAAGAAGAAAAACTGGTCAACTCCAGCGACTGGGGATACGACGCTCAGGCCTTTGCCCGCTGGCGACCGGAG
TACGGTTATTTCGCCAAACAGGCGGGGTTTACCGTTAAAACTTCTGCCAGCCTTGCGGCTTTATGGCAGGTGGTGAATCA
AATCGGCGGTAGAGAGCGTTATTTCTTTGGCAATATTTTGTGGCAGACCCGGGCGCTGATGGACCGCGCGATCGGTCATA
AGTTAGCGAAAGGCCGCCCGGAGCGTGAATATTTGCAAACTGGCGATGCGGTAGACAGCTGGAAAGTGATTATCGTCGAA
CCGGAAAAACAACTTGCGTTGTTATTTGGCATGAAAGCGCCGGGGCTGGGGCGCCTGTGTTTTACCCTGGAGGATAAAGG
CGACTACCGCACCATCGATGTTCGCGCGTTCTGGCATCCGCATGGGATGCCAGGGCTGATTTACTGGTTACTGATGATCC
CCGCGCATCTGTTTATTTTTCGCGGAATGGCAAAACGAATCGCCAGACTGGCAGAACAAAGCACAGATTAA

Upstream 100 bases:

>100_bases
CCGATTGTCCGCCTGGTAACCCATCTCGATGTCTCGCGTGAACAACTGGCAGAAGTCGCAGCCCACTGGCGCACTTTCCT
GGCGCGTTAAGGAGCGAAAC

Downstream 100 bases:

>100_bases
TCGACAAAACCTGCGTTATTCTTTCACGTTTCCCATTGCATCAAGGGGGAAATCACGGAAGAATGCGCACGTCATTTTCT
CAACAACAGTGGATTGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MPQRILVLGASGYIGQHLVHALSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQNIDTVYFLVHSMGEG
GDFIAQERQVALNVRDALREAPVKQLIFLSSLQAPPHEQSDHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLAVLTPPRWVRSRTTPIALENLLHYLVALLDHPAREHRIFEAAGPEVLSYQQQFEHFMAVSGKHRWLIPIPFPTR
WISVWFLNVITSVPSTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEKLVNSSDWGYDAQAFARWRPE
YGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVE
PEKQLALLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLIYWLLMIPAHLFIFRGMAKRIARLAEQSTD

Sequences:

>Translated_476_residues
MPQRILVLGASGYIGQHLVHALSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQNIDTVYFLVHSMGEG
GDFIAQERQVALNVRDALREAPVKQLIFLSSLQAPPHEQSDHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMR
DMVYNLAVLTPPRWVRSRTTPIALENLLHYLVALLDHPAREHRIFEAAGPEVLSYQQQFEHFMAVSGKHRWLIPIPFPTR
WISVWFLNVITSVPSTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEKLVNSSDWGYDAQAFARWRPE
YGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVE
PEKQLALLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLIYWLLMIPAHLFIFRGMAKRIARLAEQSTD
>Mature_475_residues
PQRILVLGASGYIGQHLVHALSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQNIDTVYFLVHSMGEGG
DFIAQERQVALNVRDALREAPVKQLIFLSSLQAPPHEQSDHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRD
MVYNLAVLTPPRWVRSRTTPIALENLLHYLVALLDHPAREHRIFEAAGPEVLSYQQQFEHFMAVSGKHRWLIPIPFPTRW
ISVWFLNVITSVPSTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEKLVNSSDWGYDAQAFARWRPEY
GYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVEP
EKQLALLFGMKAPGLGRLCFTLEDKGDYRTIDVRAFWHPHGMPGLIYWLLMIPAHLFIFRGMAKRIARLAEQSTD

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=476, Percent_Identity=96.218487394958, Blast_Score=941, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53682; Mature: 53551

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRILVLGASGYIGQHLVHALSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL
CCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
PALLQNIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREAPVKQLIFLSSLQAPPHEQS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCH
DHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLAVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PIALENLLHYLVALLDHPAREHRIFEAAGPEVLSYQQQFEHFMAVSGKHRWLIPIPFPTR
HHHHHHHHHHHHHHHCCCHHHCEEHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
WISVWFLNVITSVPSTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNIL
HCCCCCCCCCHHHHHHCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHCCCCEEEHHHHH
WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLC
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCHHEEHHCCCCCCCCCEEE
FTLEDKGDYRTIDVRAFWHPHGMPGLIYWLLMIPAHLFIFRGMAKRIARLAEQSTD
EEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQRILVLGASGYIGQHLVHALSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNL
CCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
PALLQNIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREAPVKQLIFLSSLQAPPHEQS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCH
DHLRARQATADILREAGVPVTELRAGIIVGAGSAAFEVMRDMVYNLAVLTPPRWVRSRTT
HHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCCC
PIALENLLHYLVALLDHPAREHRIFEAAGPEVLSYQQQFEHFMAVSGKHRWLIPIPFPTR
HHHHHHHHHHHHHHHCCCHHHCEEHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHH
WISVWFLNVITSVPSTTAKALIQGLKHDLLADDTALRALIPQRLIAFDDAVRRTLKEEEK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGRERYFFGNIL
HCCCCCCCCCHHHHHHCCCCCCCHHHHCCCEEECCHHHHHHHHHHHHHCCCCEEEHHHHH
WQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIIVEPEKQLALLFGMKAPGLGRLC
HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEECCCHHEEHHCCCCCCCCCEEE
FTLEDKGDYRTIDVRAFWHPHGMPGLIYWLLMIPAHLFIFRGMAKRIARLAEQSTD
EEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]