Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is artJ [H]
Identifier: 218548379
GI number: 218548379
Start: 1032026
End: 1032757
Strand: Reverse
Name: artJ [H]
Synonym: EFER_1003
Alternate gene names: 218548379
Gene position: 1032757-1032026 (Counterclockwise)
Preceding gene: 218548380
Following gene: 218548368
Centisome position: 22.51
GC content: 46.04
Gene sequence:
>732_bases ATGAAAAAGTTAGTTCTTGCCGCTTTACTTGCATCCTGTGCATTCGGCGCTTCTGCCGCAGAGAAAATCAATTTCGGCGT ATCCGCGACCTATCCTCCCTTTGAATCTATAGGTGCTAATAATGAGATTGTCGGCTTTGATATCGACCTGGCAAAAGCGT TATGCAAACAGATGCAGGCAGAATGTACTTTTACTAATCACGCTTTCGACAGCCTGATCCCGTCACTGAAATTCAAAAAG TATGACGCCGTTATCTCCGGTATGGATATCACGCCAGAGCGTAGCAAGCAGGTATCGTTTACCACGCCCTACTACGAAAA CTCAGCCGTCGTGATTGCCAAAAAAGATACCTACAAAACGTTTGCCGACCTGAAAGGCAAACGCATTGGGATGGAAAACG GCACCACCCACCAGAAATATATTCAGGATCAACACCCGGAAGTGAAAACTGTCTCCTATGACAGTTATCAAAATGCCGTT ATCGATCTAAAAAATGGTCGTATTGATGGGGTATTTGGTGACACAGCGGTGGTTAATGAATGGCTGAAAACCAATCCACA ACTGGGCGTTGCAACAGAGAAAGTAACCGACCCGCAGTACTTCGGCACCGGTCTGGGCATCGCTGTACGTCCGGATAATA AAGCCCTGCTGGAAAAACTGAATAACGCACTGGCAGCGATTAAAGCAGATGGTACGTATAAAAAAATCAATGACCAGTGG TTCCCGCAGTAA
Upstream 100 bases:
>100_bases TTTAATCATATTTATTGCATATAAATTCACTTGATGGCATTGTTATCTCATGCCGCAGACACGGCCAAAAATCATAAGAT TGACAGACGGGAGTTCCATC
Downstream 100 bases:
>100_bases GATTCAGAAAGCCGCAGCCGCGGCTTTTTTATTGCTTCACCAACAGTGTCAGCACTTCATAGTGCGCGGTGTGCGGGAAC ATATCAAAAAGCTGTACCCG
Product: arginine ABC transporter periplasmic-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFKK YDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAV IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYKKINDQW FPQ
Sequences:
>Translated_243_residues MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFKK YDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAV IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYKKINDQW FPQ >Mature_243_residues MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFKK YDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAV IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYKKINDQW FPQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=97.5308641975309, Blast_Score=492, Evalue=1e-141, Organism=Escherichia coli, GI1787088, Length=241, Percent_Identity=63.9004149377593, Blast_Score=338, Evalue=2e-94, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=40.6113537117904, Blast_Score=167, Evalue=8e-43, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=36.3636363636364, Blast_Score=158, Evalue=3e-40, Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=32.7272727272727, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=29.9180327868852, Blast_Score=106, Evalue=1e-24,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26707; Mature: 26707
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHHHH ECTFTNHAFDSLIPSLKFKKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT CCEECHHHHHHHHCCCCHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHH FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAVIDLKNGRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYKKINDQW HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCEEECCCCC FPQ CCC >Mature Secondary Structure MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQA CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHCCCCCCEEEECHHHHHHHHHHHHH ECTFTNHAFDSLIPSLKFKKYDAVISGMDITPERSKQVSFTTPYYENSAVVIAKKDTYKT CCEECHHHHHHHHCCCCHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHH FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAVIDLKNGRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYKKINDQW HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCEEECCCCC FPQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]