Click here to switch to the map view.

The map label for this gene is glpB [H]

Identifier: 218548305

GI number: 218548305

Start: 939723

End: 940982

Strand: Reverse

Name: glpB [H]

Synonym: EFER_0924

Alternate gene names: 218548305

Gene position: 940982-939723 (Counterclockwise)

Preceding gene: 218548306

Following gene: 218548304

Centisome position: 20.51

GC content: 55.4

Gene sequence:

>1260_bases
ATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCG
CTGTGCCATTGTCACTCGTGGTCAAAGCGCGCTGCATTTCTCATCCGGTTCGCTGGATTTGCTGAGCCATCTGCCAGATG
GTCAAGCTGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCTGCCCATCCTTACTCTCTTCTCGGG
CCACAACGCGTGCTCGATCTCGCTTGTCAGGCACAGACATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGA
ACAGGCTCACCAGCGGATTACGCCGCTCGGCACTCTGCGCTCTACCTGGTTAAGTTCGCCAGAAGTTCCCGTCTGGCCGC
TACCCGCGAAGAAGATATGTGTAGTGGGGATAAGCGGGCTGATGGATTTTCAGGCGCATCTTGCGGCGGCTTCGTTGCGC
GAACTGGATCTTTCGGTTGAAACTGCTGAAATTGAACTGCCGGAACTGGATGTGCTACGCAACAACGCCACCGAGTTTCG
CGCGGTGAATATCGCCCGTTTCCTTGATAACGAAGAGAACTGGTCGCTATTACTTGATGCGCTTATTCCTGTCGCCAATA
CCTGCGAAATGATCCTGATGCCCGCCTGCTTCGGCCTGGCCGATGACAAACTGTGGTATTGGTTGAATGAAAAACTACCT
TGTTCACTGATGCTTTTGCCAACGCTGCCGCCATCCGTGCTGGGCATTCGTCTGCAAAACCAGTTACAGCGCCAGTTTGT
GCGCCAGGGTGGCGTGTGGATGCCGGGCGATGAAGTGAAAAAAGTGACCTGTAAAAATGGCATGGTGAATGAAATCTGGA
CCCGCAATCACGCCGATATCCCGCTGCGTCCACGCTTTGCCGTGCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTA
GCGGAACGTGAAGGCATTCGTGAGCCGATTGTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGG
CGATTTTTTTGCGCCGCAACCGTGGCAGCAATTCGGTGTAACCACTGATGAGGCACTACGCCCGTCACAGGCAGGGAAAA
CCATTGAGAACCTGTTTGCCATCGGTTCGGTGCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGAGTTTGT
GCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGA

Upstream 100 bases:

>100_bases
AAAGGCGTGCAACCCATTGCCTGGGGAGACGCACTGCGCGAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGG
TCTGGAGAAGGAGCAGAAAG

Downstream 100 bases:

>100_bases
ACGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGAGTGAATCCCAGCTAT
CCAGGGCCAAAACAAGCCGG

Product: anaerobic glycerol-3-phosphate dehydrogenase subunit B

Products: NA

Alternate protein names: Anaerobic G-3-P dehydrogenase subunit B; Anaerobic G3Pdhase B [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLLG
PQRVLDLACQAQTLIAESGAQLQGSVEQAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWSLLLDALIPVANTCEMILMPACFGLADDKLWYWLNEKLP
CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGMVNEIWTRNHADIPLRPRFAVLASGSFFSGGLV
AEREGIREPIVGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGKTIENLFAIGSVLGGFDPIAQGCGGGVC
AVSALHAAQQIAQRAGGQQ

Sequences:

>Translated_419_residues
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLLG
PQRVLDLACQAQTLIAESGAQLQGSVEQAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWSLLLDALIPVANTCEMILMPACFGLADDKLWYWLNEKLP
CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGMVNEIWTRNHADIPLRPRFAVLASGSFFSGGLV
AEREGIREPIVGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGKTIENLFAIGSVLGGFDPIAQGCGGGVC
AVSALHAAQQIAQRAGGQQ
>Mature_419_residues
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDIHSGLESLRQQAPAHPYSLLG
PQRVLDLACQAQTLIAESGAQLQGSVEQAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLR
ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWSLLLDALIPVANTCEMILMPACFGLADDKLWYWLNEKLP
CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGMVNEIWTRNHADIPLRPRFAVLASGSFFSGGLV
AEREGIREPIVGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGKTIENLFAIGSVLGGFDPIAQGCGGGVC
AVSALHAAQQIAQRAGGQQ

Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor [H]

COG id: COG3075

COG function: function code E; Anaerobic glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic G-3-P dehydrogenase subunit B family [H]

Homologues:

Organism=Escherichia coli, GI1788575, Length=419, Percent_Identity=96.6587112171838, Blast_Score=792, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR009158 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 45393; Mature: 45393

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDI
CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHCCCCCCHHHHH
HSGLESLRQQAPAHPYSLLGPQRVLDLACQAQTLIAESGAQLQGSVEQAHQRITPLGTLR
HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHH
STWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLR
HHHCCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHH
NNATEFRAVNIARFLDNEENWSLLLDALIPVANTCEMILMPACFGLADDKLWYWLNEKLP
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGMVNEIWTRNHADI
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHCCCCHHHHHCCCCCCC
PLRPRFAVLASGSFFSGGLVAEREGIREPIVGLDVLQTATRGEWYKGDFFAPQPWQQFGV
CCCCCEEEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
TTDEALRPSQAGKTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
CCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQAVTDI
CCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHCCCCCCHHHHH
HSGLESLRQQAPAHPYSLLGPQRVLDLACQAQTLIAESGAQLQGSVEQAHQRITPLGTLR
HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHH
STWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLR
HHHCCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHH
NNATEFRAVNIARFLDNEENWSLLLDALIPVANTCEMILMPACFGLADDKLWYWLNEKLP
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
CSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGMVNEIWTRNHADI
EEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHCCCCHHHHHCCCCCCC
PLRPRFAVLASGSFFSGGLVAEREGIREPIVGLDVLQTATRGEWYKGDFFAPQPWQQFGV
CCCCCEEEEECCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
TTDEALRPSQAGKTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
CCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA