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The map label for this gene is ypeC

Identifier: 218548161

GI number: 218548161

Start: 794360

End: 794686

Strand: Reverse

Name: ypeC

Synonym: EFER_0778

Alternate gene names: 218548161

Gene position: 794686-794360 (Counterclockwise)

Preceding gene: 218548162

Following gene: 218548159

Centisome position: 17.32

GC content: 53.52

Gene sequence:

>327_bases
ATGTTCAGGTCACTGTTTCTGGCGGCCGCCCTGATGGCATTTACCCCGCTTGCGGCAAACGCAGGTGAAATCACCCTACT
GCCGTCAATCAAATTACAAATTGGCGATCGCGATCATTATGGTAATTACTGGGACGGTGGTCACTGGCGCGACCGTGACT
ACTGGCATCGCAATTATGAATGGCGTAAAAACCGCTGGTGGCGTCATGATAATGGCTACCACCGTGGCTGGGATAAGCGT
AAAGCCTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGATGATCATCGCGGAAAAGGCCGCGGACATGGGCATCG
CCATTAA

Upstream 100 bases:

>100_bases
CTTTATGATTTAAGAGTTATGGCGATGATACGGGGCTTTACCTCCCCGTAATATTGCGTTAACAGGCCGCTGACGGCTTC
GATCGTGAAGGAGAATAACA

Downstream 100 bases:

>100_bases
ACACGTAGGGCGGATAAGGCGTTCTGCGCCGCATCCGCCAGTGGTGCCAGCTCCGACACCAGTTCCACTACAATCCCAGT
GCCGTTCCCACTAACAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKR
KAYERGYREGWRDRDDHRGKGRGHGHRH

Sequences:

>Translated_108_residues
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKR
KAYERGYREGWRDRDDHRGKGRGHGHRH
>Mature_108_residues
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKR
KAYERGYREGWRDRDDHRGKGRGHGHRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yaaX

Homologues:

Organism=Escherichia coli, GI1788734, Length=108, Percent_Identity=100, Blast_Score=216, Evalue=3e-58,
Organism=Escherichia coli, GI1786186, Length=65, Percent_Identity=61.5384615384615, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPEC_ECO57 (P64543)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   F91037
- PIR:   H85881
- RefSeq:   NP_288960.1
- RefSeq:   NP_311297.1
- ProteinModelPortal:   P64543
- EnsemblBacteria:   EBESCT00000026310
- EnsemblBacteria:   EBESCT00000055797
- GeneID:   915627
- GeneID:   957602
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3656
- KEGG:   ecs:ECs3270
- GeneTree:   EBGT00050000010112
- HOGENOM:   HBG757615
- OMA:   VANAGEI
- ProtClustDB:   CLSK880380
- BioCyc:   ECOL83334:ECS3270-MONOMER
- InterPro:   IPR019638

Pfam domain/function: PF10697 DUF2502

EC number: NA

Molecular weight: Translated: 13263; Mature: 13263

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYE
CCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
WRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH
CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYE
CCHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
WRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH
CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796