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The map label for this gene is yfeN [H]

Identifier: 218548151

GI number: 218548151

Start: 781257

End: 782036

Strand: Reverse

Name: yfeN [H]

Synonym: EFER_0766

Alternate gene names: 218548151

Gene position: 782036-781257 (Counterclockwise)

Preceding gene: 218548156

Following gene: 218548150

Centisome position: 17.04

GC content: 40.9

Gene sequence:

>780_bases
ATGGAACTTACCATGACCAAAAAAATTTTGTTGGCCGGATATGCTGCGACGTTACTCGCTTTACCACAACTGGTGCATGC
TGAATTTAAAGGCGGATTTGCAGATATAGGTCTGCATTATCTTGACTGGACATCAGACACTACCAGGAAAACCAGTAATA
AATCTCACAAAGATGATTTTGGCTATCTGGAAATTGAAGGTGGTGCAAACTTCAGTTGGGGTGAACTGTACGGTTTTTTT
GACTGGGAGAATTTCTATAACAGTCGCCATACGAAACCAGGCAGTGAGCAGCGATATACTTTTAAAAATACCAACCGTAT
TTATTTAGGTGATAGCGGATTAAATCTTTATTTACATGCTTACGGTACTTACGGTTCACCAAATCGTGTTAATTTCCACG
ATGATATGTTCCTTTATGGCTTAGGATATAATTTTACAGGAAACGGTTACTGGTTTAAGCCATTTTTTGCAAAACGTTAT
ACCGATCAGACCTATTATACCGGGGATAATGGTTATGTGATGGGATGGGTTGCAGGCTATAGTTTTATGCTTGGTAGTGA
GAAATTTACCCTGACAAACTGGAACGAATATGAGTTTGATCGCGATGAAAGCTACGCCGCAGGTAACGGCGGTAAAGACG
GTATCAATGGAGCCGTCGCTTTTTGGTGGAATGCCACGCCTCATTTTACTGCTGGAATACAGTACCGCTACGCCGATAAT
AAACTTGGCGAAGCCTTTCTCCAGGACGGCATAATTTATTCAGTTAAATACGTCTTTTGA

Upstream 100 bases:

>100_bases
AAAATAAAGTATTGGTATAAACGGCTAACACCAAAATAAAATCACCAACAATCATAATTTACTCATCGTACTGCAATTCA
TTAAAATAATACCTGAACAG

Downstream 100 bases:

>100_bases
TTGTTTTATAGCCAATAGCCGTCACTTCCTGGTGACGGTTCCCCCTTCCCCGCCAGAAGTTTACTATTCTCTGGCAAATG
TCGATCTCCACAGCTACATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MELTMTKKILLAGYAATLLALPQLVHAEFKGGFADIGLHYLDWTSDTTRKTSNKSHKDDFGYLEIEGGANFSWGELYGFF
DWENFYNSRHTKPGSEQRYTFKNTNRIYLGDSGLNLYLHAYGTYGSPNRVNFHDDMFLYGLGYNFTGNGYWFKPFFAKRY
TDQTYYTGDNGYVMGWVAGYSFMLGSEKFTLTNWNEYEFDRDESYAAGNGGKDGINGAVAFWWNATPHFTAGIQYRYADN
KLGEAFLQDGIIYSVKYVF

Sequences:

>Translated_259_residues
MELTMTKKILLAGYAATLLALPQLVHAEFKGGFADIGLHYLDWTSDTTRKTSNKSHKDDFGYLEIEGGANFSWGELYGFF
DWENFYNSRHTKPGSEQRYTFKNTNRIYLGDSGLNLYLHAYGTYGSPNRVNFHDDMFLYGLGYNFTGNGYWFKPFFAKRY
TDQTYYTGDNGYVMGWVAGYSFMLGSEKFTLTNWNEYEFDRDESYAAGNGGKDGINGAVAFWWNATPHFTAGIQYRYADN
KLGEAFLQDGIIYSVKYVF
>Mature_259_residues
MELTMTKKILLAGYAATLLALPQLVHAEFKGGFADIGLHYLDWTSDTTRKTSNKSHKDDFGYLEIEGGANFSWGELYGFF
DWENFYNSRHTKPGSEQRYTFKNTNRIYLGDSGLNLYLHAYGTYGSPNRVNFHDDMFLYGLGYNFTGNGYWFKPFFAKRY
TDQTYYTGDNGYVMGWVAGYSFMLGSEKFTLTNWNEYEFDRDESYAAGNGGKDGINGAVAFWWNATPHFTAGIQYRYADN
KLGEAFLQDGIIYSVKYVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=240, Percent_Identity=85, Blast_Score=428, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 29735; Mature: 29735

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTMTKKILLAGYAATLLALPQLVHAEFKGGFADIGLHYLDWTSDTTRKTSNKSHKDDF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCCCCCCCC
GYLEIEGGANFSWGELYGFFDWENFYNSRHTKPGSEQRYTFKNTNRIYLGDSGLNLYLHA
CEEEECCCCCCCHHHEEEEECHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEE
YGTYGSPNRVNFHDDMFLYGLGYNFTGNGYWFKPFFAKRYTDQTYYTGDNGYVMGWVAGY
EECCCCCCEECCCCCEEEEEECEEECCCCEEECCHHHHHCCCCEEEECCCCEEEEEECCE
SFMLGSEKFTLTNWNEYEFDRDESYAAGNGGKDGINGAVAFWWNATPHFTAGIQYRYADN
EEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCEEECEEEEECCC
KLGEAFLQDGIIYSVKYVF
HHHHHHHHCCEEEEEEEEC
>Mature Secondary Structure
MELTMTKKILLAGYAATLLALPQLVHAEFKGGFADIGLHYLDWTSDTTRKTSNKSHKDDF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCCCCCCCCCCCCC
GYLEIEGGANFSWGELYGFFDWENFYNSRHTKPGSEQRYTFKNTNRIYLGDSGLNLYLHA
CEEEECCCCCCCHHHEEEEECHHHHHCCCCCCCCCCCEEEEECCCEEEEECCCCEEEEEE
YGTYGSPNRVNFHDDMFLYGLGYNFTGNGYWFKPFFAKRYTDQTYYTGDNGYVMGWVAGY
EECCCCCCEECCCCCEEEEEECEEECCCCEEECCHHHHHCCCCEEEECCCCEEEEEECCE
SFMLGSEKFTLTNWNEYEFDRDESYAAGNGGKDGINGAVAFWWNATPHFTAGIQYRYADN
EEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCEEEEEECCCCCEEECEEEEECCC
KLGEAFLQDGIIYSVKYVF
HHHHHHHHCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]