| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is sseA [H]
Identifier: 218548042
GI number: 218548042
Start: 649431
End: 650276
Strand: Reverse
Name: sseA [H]
Synonym: EFER_0651
Alternate gene names: 218548042
Gene position: 650276-649431 (Counterclockwise)
Preceding gene: 218548057
Following gene: 218548030
Centisome position: 14.17
GC content: 51.06
Gene sequence:
>846_bases ATGACCACAACCTGGTTTGTTGCAGCCGACTGGCTCGCCGAGCATATTAACGATCCAGAAATTCAAATTATTGATGCCCG TATGGCTCCACCTGGAGAGAAGGAGCGTCATGTTTTACAGGAGTACCGCGAAGGACATATTCCTGGTGCCGTTTTTTTCG ATATTGAAGCCCTTTCTGATCACACGTCCTCCTTTCCACATATGATGCCGCGCCCGGAAGCGTTTGCCGTCGCTATGCGT GAACTGGGCGTTAATCAGGATAAGCATCTGATTGTATACGATGAAGGTAATCTCTTTTCTGCGCCACGCGCATGGTGGAT GCTGCGCACTTTTGGTGTCGAAAGAGTATCGATTCTCGCTGGCGGATTAACAGGATGGCAACGCGATGAGTTACTTCTGG AAAAAGGAGATGTGGAACTACCTGAAGGCGAGTTTACAGCAAAATTCACCCCGGATGCGGTAGTAAATGTCACGGACGTT CTGTTGGCAAGCCATGAAAAAACGGCGCAAATTATTGATGCCCGCCCGGCTGCACGTTTTAATGCAGAAGTTGATGAACC TCGCGCAGGTTTACGTCGCGGACATATTCCCGGTGCACTGAATGTTCCGTGGACGGAACTGGTGCGCGAAGGCGAACTGA AAACGACCGATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCT GGTGTAACGGCGGCCGTGGTTTTGTTGGCACTCGCGACACTCGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAG TGAATGGGGCGCACGAGCAGATTTACCGGTTGAGCCAGTGAAATAA
Upstream 100 bases:
>100_bases GCGAAATGTGGCTTAAGCAGCCAAATTAATCCCTTTTGCTTGTCGCTTTACGCTAAACCACCGACAATTTATCAGTAACC CGGCAACAATGGAGATGTCT
Downstream 100 bases:
>100_bases GCTTTATACAGGCAATAAAAAACCGCCAAATTTGGCGGTTTTTTATTGCTGGTCTGGTTCGCGGCCTTTCCAGCAGGTTG TATTACTGCAAGTGTATCTC
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTTTWFVAADWLAEHINDPEIQIIDARMAPPGEKERHVLQEYREGHIPGAVFFDIEALSDHTSSFPHMMPRPEAFAVAMR ELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVERVSILAGGLTGWQRDELLLEKGDVELPEGEFTAKFTPDAVVNVTDV LLASHEKTAQIIDARPAARFNAEVDEPRAGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS GVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK
Sequences:
>Translated_281_residues MTTTWFVAADWLAEHINDPEIQIIDARMAPPGEKERHVLQEYREGHIPGAVFFDIEALSDHTSSFPHMMPRPEAFAVAMR ELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVERVSILAGGLTGWQRDELLLEKGDVELPEGEFTAKFTPDAVVNVTDV LLASHEKTAQIIDARPAARFNAEVDEPRAGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS GVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK >Mature_280_residues TTTWFVAADWLAEHINDPEIQIIDARMAPPGEKERHVLQEYREGHIPGAVFFDIEALSDHTSSFPHMMPRPEAFAVAMRE LGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVERVSILAGGLTGWQRDELLLEKGDVELPEGEFTAKFTPDAVVNVTDVL LASHEKTAQIIDARPAARFNAEVDEPRAGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSG VTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=275, Percent_Identity=40, Blast_Score=203, Evalue=1e-52, Organism=Homo sapiens, GI61835204, Length=275, Percent_Identity=40, Blast_Score=203, Evalue=1e-52, Organism=Homo sapiens, GI194473681, Length=275, Percent_Identity=40, Blast_Score=203, Evalue=1e-52, Organism=Homo sapiens, GI17402865, Length=276, Percent_Identity=37.6811594202899, Blast_Score=172, Evalue=3e-43, Organism=Escherichia coli, GI87082121, Length=281, Percent_Identity=90.0355871886121, Blast_Score=519, Evalue=1e-149, Organism=Escherichia coli, GI87081967, Length=254, Percent_Identity=23.2283464566929, Blast_Score=61, Evalue=1e-10, Organism=Caenorhabditis elegans, GI115534702, Length=212, Percent_Identity=32.0754716981132, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI71997283, Length=299, Percent_Identity=23.7458193979933, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17561888, Length=268, Percent_Identity=26.4925373134328, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17543836, Length=241, Percent_Identity=24.896265560166, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17543838, Length=241, Percent_Identity=24.896265560166, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17559150, Length=251, Percent_Identity=26.2948207171315, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324825, Length=266, Percent_Identity=33.8345864661654, Blast_Score=134, Evalue=1e-32,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31119; Mature: 30987
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTWFVAADWLAEHINDPEIQIIDARMAPPGEKERHVLQEYREGHIPGAVFFDIEALSD CCEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEHHHC HTSSFPHMMPRPEAFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVERVSILA CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEECCCHHHHHHHHHCCCEEEEEE GGLTGWQRDELLLEKGDVELPEGEFTAKFTPDAVVNVTDVLLASHEKTAQIIDARPAARF CCCCCCCCCHHHEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCCHHC NAEVDEPRAGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS CCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCC GVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK CHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCCCC >Mature Secondary Structure TTTWFVAADWLAEHINDPEIQIIDARMAPPGEKERHVLQEYREGHIPGAVFFDIEALSD CEEEEEHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEHHHC HTSSFPHMMPRPEAFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVERVSILA CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEECCCHHHHHHHHHCCCEEEEEE GGLTGWQRDELLLEKGDVELPEGEFTAKFTPDAVVNVTDVLLASHEKTAQIIDARPAARF CCCCCCCCCHHHEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHCCCCCHHC NAEVDEPRAGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGS CCCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEECCC GVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK CHHHHHHHHHHHHCCCCCEEEECCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]