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The map label for this gene is yphA [H]

Identifier: 218548026

GI number: 218548026

Start: 634411

End: 634905

Strand: Reverse

Name: yphA [H]

Synonym: EFER_0635

Alternate gene names: 218548026

Gene position: 634905-634411 (Counterclockwise)

Preceding gene: 218548028

Following gene: 218548024

Centisome position: 13.84

GC content: 47.88

Gene sequence:

>495_bases
TTGCCCAGAGATGGCGAGCAGCAAAACCGTGTATTACGGTTAAATCACACATTTATGCAAATGGACTGTTTTATGAACAC
ATTGCGCTATTTTGAATTCGGAGCTTCGCGCCCCGTTCTGTTGTTGATTGCTCGTATAGCTATCATATTGATATTCATCA
TTTTTGGGTTCCCCAAAATGATGGGGTTTGAAGGTACGGTGCAATACATGGCCTCGTTGGGCGCGCCCATGCCAATGCTG
GCAGCCATTATTGCCGTCATCATGGAGGTACCTGCTGCTATTTTAATTGTTCTCGGGTTTTACACTCGCCCCCTCGCGGT
GCTCTTTATCTTCTACACCCTGGGTACAGCAGTTATTGGTCACCATTATTGGGATATGACCGGGGATGCAGTCGGGCCAA
ATATGATTAACTTCTGGAAGAATATCAGTATCGCCGGAGCATTTTTATTGCTGGCGATTACCGGGCCAGGGGCAATTTCC
CTCGACCGCCGCTAG

Upstream 100 bases:

>100_bases
GTATTAACAGAATGTTAAATGAATTTTGAGCGATTAAACATCCATCCGCCGTGGTTGCTGGTATCCATCAGCTGTCCAGG
AATATTGCCAATTAACTCTT

Downstream 100 bases:

>100_bases
AAACATTAAAGGCCGCAATTGCGGCCTTTAATATATCTTTCTGCGAGATTACGCGTAAACCGGGTAACGTGCGCAGATGT
CGAGAACTTTACCTTTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPRDGEQQNRVLRLNHTFMQMDCFMNTLRYFEFGASRPVLLLIARIAIILIFIIFGFPKMMGFEGTVQYMASLGAPMPML
AAIIAVIMEVPAAILIVLGFYTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNISIAGAFLLLAITGPGAIS
LDRR

Sequences:

>Translated_164_residues
MPRDGEQQNRVLRLNHTFMQMDCFMNTLRYFEFGASRPVLLLIARIAIILIFIIFGFPKMMGFEGTVQYMASLGAPMPML
AAIIAVIMEVPAAILIVLGFYTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNISIAGAFLLLAITGPGAIS
LDRR
>Mature_163_residues
PRDGEQQNRVLRLNHTFMQMDCFMNTLRYFEFGASRPVLLLIARIAIILIFIIFGFPKMMGFEGTVQYMASLGAPMPMLA
AIIAVIMEVPAAILIVLGFYTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNISIAGAFLLLAITGPGAISL
DRR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=140, Percent_Identity=94.2857142857143, Blast_Score=268, Evalue=1e-73,
Organism=Escherichia coli, GI87082210, Length=127, Percent_Identity=42.5196850393701, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 18277; Mature: 18146

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDGEQQNRVLRLNHTFMQMDCFMNTLRYFEFGASRPVLLLIARIAIILIFIIFGFPKM
CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MGFEGTVQYMASLGAPMPMLAAIIAVIMEVPAAILIVLGFYTRPLAVLFIFYTLGTAVIG
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHYWDMTGDAVGPNMINFWKNISIAGAFLLLAITGPGAISLDRR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEECCCC
>Mature Secondary Structure 
PRDGEQQNRVLRLNHTFMQMDCFMNTLRYFEFGASRPVLLLIARIAIILIFIIFGFPKM
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MGFEGTVQYMASLGAPMPMLAAIIAVIMEVPAAILIVLGFYTRPLAVLFIFYTLGTAVIG
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHYWDMTGDAVGPNMINFWKNISIAGAFLLLAITGPGAISLDRR
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]