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Identifier: 218249019

GI number:

Start: 4530027

End: 4533503

Strand: Reverse

Name: Not Available

Synonym: PCC8801_4312

Alternate gene names: NA

Gene position: NA

Preceding gene: 218249021

Following gene: 218249018

Centisome position: NA

GC content: NA

Gene sequence:

>3477_bases
ATGACTCTTTCTTCTCTAATTCGCAATCTCCAAAAATCTCCCCTAACAAAAGAACTATTAGAAAAATTAAATAAAACAGG
TTCGTTAGGATTAAAGGGTGTTCCTCGACTCCCGAAAGGGCTAGTATCTTCAGCTTTAGCGCAATCTCTAGATAACAATT
TATTGGTGATTTGTGCCACTCTTGAAGAAGCGGGAAGATGGGCAGCCCAATTAGAGATGATGGGATGGAAAAGTGTTAAT
TTTTATCCTACCTCAGAAGCGTCTCCCTACGAAGCATTTAACCCAGAATCAGAGATGATTTGGGGACAAATGCAAGTCCT
ATCTATTCTCAATTCTCAACAGAATGGGTTAGCGATTGTTACCACAGAAAAAGCCTTACAACCCCATTTACCTCCCTCGA
CTGTTTTTGAAACGTACTGTTTTAATTTACAAATAGGAATCACTAAAACGTCCCAAGAAATTGATGAAACATTAGTCAGG
TTAGGCTATGAAAGGGTTGCTTTGGTGGAAACTGAAGGACAGTGGAGTAGACGAGGAGATATTGTCGATATTTTTCCTGT
TTCTTCAGAGTTACCTATTCGCTTAGAATGGTTCGGAGATGCATTAGAAAAAATTCGAGAATTAGATCCTGCAACACAGC
GTTCTTTAGATAAACTTGAGCAAGTTATTTTAACTCCTACCAGTTTTAATCCGATTATTGCTAATACGCTTAAAAACAAA
AATATTAACTTACAAAATTATTTATCAGATGAAGAAAAAGAAGGATTAGATAATGCTAATTTCCCCGAAGGAATGGCAAG
GTTATTAGGAATTGCCTTTGAACAACCTGCTTCATTATTAGATTATTTACGCGAGAATACCCTATGTGTTTTTGATGAAG
TCGAACAGTGTCAATCCCATAGCGATCGCTGGTTAGACTATGTAGAAGATAATTGGCAAGAATTAGATCCTCCTTTACCT
AAAATTCATCGTCCGTTTAGTGAGTCATTAAAATTAGCTAAAAAGTTTCCGATTTTATACCTATCTGAACTATCAGAAGT
AACCGATAAGAATGCCTTAGATTTATCGAGTCGTCCTATTCCTACCACTCCTCATCAATTCGCTAAAATCGCTGAAATCT
TACGAGGAAAACGAGAAATTTATAGCGGTATTACCTTAAATAAATATTCAACTTGGTTAATTTCCGCCCAACCCACTCGA
ACCGTTTCTTTGTTAGAAGAACATGACTGTCCCGCGCAATTTATTCCTAACAAAAAAGACTATCCAGGGATTGAAAAATG
CCATATTCAAGGGACAGCCGTTGCTTTAAAATATTCAGGAGTAGCTGAATTAGAAGGGTTTATTTTACCAACTTTTCGCA
TTGTTGTTATCACCGATAGAGAGTTTTTTGGACAGCACGTTTTAGCCCCTTCTGGGTATATTCGCAAACGACGACGCGCT
GCTTCTAAACAAGTTGATTTAAACCAACTTAATCCAGGAGATTATGTTATTCATAAAAACCATGGACTTGGTAAATTTTT
AAAACTCGAAAGTTTAGCAACTCGTGAGTATTTAGTCATTCAATATGAAGATGGATTATTAAGGGTTCCAGCCGATTCTT
TTGATAGTTTATCCCGCTATCGACACACAGGAAGTCACCCCCCCGAACTGCATAAAATGACGGGTAAAATTTGGGAAAAA
ACAAAACAAAGAGTCCGTAAAAGCATCAAAAAACTAGCCGTTGATTTGCTAAATTTGTATGCTAAACGAGCCAAAAAAGA
AGGCTTTATTTATCCTCCTGATACCCCTTGGCAAGAGGAATTAGAAGACTCTTTTCCCTATCAACCCACTCCCGATCAAT
TAAAAGCGGTTCAAGATGTAAAAATGGACTTAGAAAGCGATCGCCCCATGGATCGATTAGTGTGTGGGGATGTCGGGTTT
GGCAAAACAGAAGTTGCTGTGAGGGCTATTTTTAAAGCCGTTACCAGTGGACATAAACAAGTCGCTTTACTTGCCCCGAC
AACCATTTTAACCCAACAACATTATCATACCCTGAAAGAACGATTTGCCCCCTATCCAATTAATATTGGCTTATTAAATC
GCTTTAGGACAACCTCAGAAAAAAAGGATATTGTCCAACGCTTAGCAACGGGAGAATTAGACATTGTTGTAGGAACCCAT
CAACTCTTAGGACAAAGTGTGAAATTTAAAAATTTAGGCTTATTAGTTATCGATGAAGAACAACGATTTGGGGTTAACCA
AAAAGAGAAAATAAAAGTCCTAAAAACAGAAGTTGATGTCCTTACTTTAACTGCAACTCCCATTCCTCGAACCCTCTATA
TGTCGCTTTCTGGTATTCGAGAAATTAGCTTAATTACTACCCCTCCCCCATCCCGTCGTCCCATCAAAACCCACCTTTCG
AGTTATAATCCTGACGTAGTGAGAACCGCTATTCGTAACGAATTAGATCGGGGAGGACAGATATTTTATGTTGTTCCCAG
AGTTGAAGGAATTGAAGAAGTCGCCGGACAAATTCAACAAATGGTTCCCAGTGCTAGAATTGTGATTGCCCATGGTCAAA
TGGATGTTAATGACCTAGAAATGACCATGCTAGGTTTTAATAATGGCGAAGCTGATATCCTCGTTTGTACTACGATTATT
GAATCAGGATTAGACATTCCTAGAGTTAATACTATTATCGTCGAAGATGCCCAAAAATTTGGCTTATCCCAACTGTATCA
ATTAAGAGGAAGAGTGGGGCGATCGGGGATACAAGCTCATGCTTGGTTATTATATCCCAACAAAGGACAACTAAGCGAAA
CGGCAAGGCAAAGATTGAGGGCATTACAAGAATTTAGTCAACTCGGTTCAGGGTATCAATTAGCTACCCGTGACATGGAA
ATTCGGGGAGTTGGTAACTTATTGGGGGCTGAACAATCAGGACAAATGATGGCTATTGGGTTTGAATTGTATATGGAAAT
GTTACAAGAAGCCATCAAAGAAATTCAAGGACAAGAAATTCCTAAAGTTGATGAAACCCAAATAGATTTACAGCTAACTG
CCTTTATTCCGTCCGATTATATTCCAGATTTACAACAAAAAATGGATGCTTATCGAAGAATTGCCATGGCTAATTCTAAA
GAGCAATTAGAGGAAATTGTTAAAGATTGGACTGATAGATACGGAACGATTCCTTCCCCTGTTAGACAACTTTTACAAGT
GATAGAGTTGAAACAAATTGGTAAATCTTTAGGTTTTTCTCGCATTAAAGTCGAAGGAAAACAAAACGTTGTTTTAGAAA
CCCCAATGGAAGAACCTGCTTGGAAATTATTACAAGAAAATTTACCCAATCATCTGCGATCGCGTTTTGTTTATAGTCCT
AAAAAAGTAACCGTTAGGGGATTAGGAATTCTTAAACCTCAGCAACAATTAGAAAACTTAATTGAGTGGTTAGGTAAGAT
GAAAGGGGCTCTACCGGAGGAGAAAATAGGGGATTGA

Upstream 100 bases:

>100_bases
AAGTTCTCATTTAAAAATACTTGAGACAATTAAGCAGTCAAAGATTAATTGCTTTAATTTAACTAATTTGTTGGTGAACT
TTTACTAACTTTTGAAAAAG

Downstream 100 bases:

>100_bases
TCTCACGCAGAGGCGCAGAGTCGCAGAGGAGGAGAGAATGAGAGAGAATGAGGTAACGGGTATGATTGTGGATGCAGCTT
ATCAGATTCATATTCGCTTG

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1158_residues
MTLSSLIRNLQKSPLTKELLEKLNKTGSLGLKGVPRLPKGLVSSALAQSLDNNLLVICATLEEAGRWAAQLEMMGWKSVN
FYPTSEASPYEAFNPESEMIWGQMQVLSILNSQQNGLAIVTTEKALQPHLPPSTVFETYCFNLQIGITKTSQEIDETLVR
LGYERVALVETEGQWSRRGDIVDIFPVSSELPIRLEWFGDALEKIRELDPATQRSLDKLEQVILTPTSFNPIIANTLKNK
NINLQNYLSDEEKEGLDNANFPEGMARLLGIAFEQPASLLDYLRENTLCVFDEVEQCQSHSDRWLDYVEDNWQELDPPLP
KIHRPFSESLKLAKKFPILYLSELSEVTDKNALDLSSRPIPTTPHQFAKIAEILRGKREIYSGITLNKYSTWLISAQPTR
TVSLLEEHDCPAQFIPNKKDYPGIEKCHIQGTAVALKYSGVAELEGFILPTFRIVVITDREFFGQHVLAPSGYIRKRRRA
ASKQVDLNQLNPGDYVIHKNHGLGKFLKLESLATREYLVIQYEDGLLRVPADSFDSLSRYRHTGSHPPELHKMTGKIWEK
TKQRVRKSIKKLAVDLLNLYAKRAKKEGFIYPPDTPWQEELEDSFPYQPTPDQLKAVQDVKMDLESDRPMDRLVCGDVGF
GKTEVAVRAIFKAVTSGHKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTTSEKKDIVQRLATGELDIVVGTH
QLLGQSVKFKNLGLLVIDEEQRFGVNQKEKIKVLKTEVDVLTLTATPIPRTLYMSLSGIREISLITTPPPSRRPIKTHLS
SYNPDVVRTAIRNELDRGGQIFYVVPRVEGIEEVAGQIQQMVPSARIVIAHGQMDVNDLEMTMLGFNNGEADILVCTTII
ESGLDIPRVNTIIVEDAQKFGLSQLYQLRGRVGRSGIQAHAWLLYPNKGQLSETARQRLRALQEFSQLGSGYQLATRDME
IRGVGNLLGAEQSGQMMAIGFELYMEMLQEAIKEIQGQEIPKVDETQIDLQLTAFIPSDYIPDLQQKMDAYRRIAMANSK
EQLEEIVKDWTDRYGTIPSPVRQLLQVIELKQIGKSLGFSRIKVEGKQNVVLETPMEEPAWKLLQENLPNHLRSRFVYSP
KKVTVRGLGILKPQQQLENLIEWLGKMKGALPEEKIGD

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA