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The map label for this gene is yhjP [H]

Identifier: 218235642

GI number: 218235642

Start: 857212

End: 858972

Strand: Reverse

Name: yhjP [H]

Synonym: BCB4264_A0895

Alternate gene names: 218235642

Gene position: 858972-857212 (Counterclockwise)

Preceding gene: 218234995

Following gene: 218233730

Centisome position: 15.85

GC content: 34.24

Gene sequence:

>1761_bases
ATGATAGAAGGAAGTGTATATATGAAAATTATGGACTATTACATTAGACTAAGACTACATGCACAAGATCAACAACATAT
GCGAAATAGCTTACAAGAATTAGCGGATGTTTTATATTGCAGTACGAAAAACGTAAAGATTTTATTAAAGAAAATGAGCG
AGGAGCAATTAATTAGCTGGACTCCAGGGCGAGGCCGCGGAAATAAAACGGAAATTCTATTTATACATAATTTCGTAGAA
GCGATTGAGTCCTATACAGATGACCTGTTAGCGCAAGAAAAATTAAAGGATGTTTTTCTTCTTTTAAAAGAACCCCTCCC
CCCTGCACTTCAAAAAAAGATAGAAAACAAACTACATCATCATTTTGGATACGAACCTTCAAATGGTATGTACGACATAT
TAAAGATTCCTATATCGAGAAAGATATTCCCATTAGATCCGGCTTTTGTGGCTGTAACTACAGAGAGCCATCTTACGAGT
CAAATTTTTGATACGTTAGTCGTCTATAACGATGTTACTGAAAAAATGGAACCACACATTGCGCATACGTGGGAATTAAG
TGAAGATGGGCTTACGTGGACTTTTTATTTACGAAAGGATGTATATTTTCATAACGAAACAGTTTTAACTTCTAAAGATG
TACAATTTTCATTTGAAAGACTAAAAGAGGTTCACTCTCCTTTCGAATGGTTAACAGAAGAAATTGTTCAAATCGAAACG
CCATCACCACTGCAAATTCGATTTCATTTAGCAAAACCAAATTTATTTTTCTTACACTATGTAAGTTCCATGCAGCTCGC
AATTTTACCGCGTGATACGAGTATTCAAAATCATCATTATATAGGTACTGGACCTTTCAAACTTGCTCATTACTCTGAAG
ATAATATCGTACTCGAAGCGTTCACTCATTATTTTAAAGAGCGCGCATTATTAGACCGTATTGAATTTTGGGGTATTCCT
GACCATGTGCAAATAGATGCTGATTATGAACTACCAAACGAAGAGGAAAATGAAAGGCATGATATACAAATAGAAGAAAT
AGGTTGTATTTATGCTAGCTTCAACTTTACAAAACCTGGTCCTCATCACGATATTTACTTTCGAAAGGCTTGGAGAGAAC
TATATGATGTTGAAACGATACTTCGTAGCATAGAGGGTAGACGAACAATTGCTGCATCAAGCTTCTTCCCTGATAGAAGC
CGCCTTGCAACAAGAAGATCCTACTCTTTAGAAAAAGCAAAAGAGTATTTGAAAAAGAGTACATATAATGGAGAAACGAT
ACATATTTACTTCTTCGCATTTAAAGATAGTGCAAATGATGCATATTTCTTAAAAGAACGATGTGAAAGTTTAGGTATAC
AAGTAGAGCTTCACCCATTTCCCGTTTCAGATTATATAGATCGCTCTATTGATAAACATGCTGATATTATTTTCATGGGA
GAAGTCTTTGCTGCCAATCATGAAATTGCATTCTTAAATGTATTTAAAAATAAAAGTTGCTTCGTAAATCGGTTCATGGA
CCCGCACTACGAAAAACAAATTAACTGTTTACTAGATACATTTTTACTAGAAGAAAATAAAGAAAAGCGTTATGAACTCA
TGTATGAGATTGAAGAGTTTTTACAAGCAGAACACATCATTTTATTTAACTATCACGTTTTAAAAAGAAAAACATACCCT
TCTTCTTTAAAAAACGTAACAATTGATTCATTTGGTTGGGCAAATTTTGCGAAGTTATGGATACAGCCATCCACGTATTA
A

Upstream 100 bases:

>100_bases
TACTCCAAAATCCCATTGTTTCCCCCTCCTTATGCTTACTTATTTTACTTTGAAAAAAAGGAAGAAAAAGGTTAGAATAT
TCTAAAGAGTTTCCCCTTTT

Downstream 100 bases:

>100_bases
CATGCAAGTTTTTATAAAAGGAGAAAAACCATGAAACGCACCCTAGAAAAAAGACTTTCTTATCTATACACAGGTGAGTT
ATTTTCAGTCATTACTTTTA

Product: putative ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MIEGSVYMKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFIHNFVE
AIESYTDDLLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPSNGMYDILKIPISRKIFPLDPAFVAVTTESHLTS
QIFDTLVVYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDVYFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIET
PSPLQIRFHLAKPNLFFLHYVSSMQLAILPRDTSIQNHHYIGTGPFKLAHYSEDNIVLEAFTHYFKERALLDRIEFWGIP
DHVQIDADYELPNEEENERHDIQIEEIGCIYASFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPDRS
RLATRRSYSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFPVSDYIDRSIDKHADIIFMG
EVFAANHEIAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHIILFNYHVLKRKTYP
SSLKNVTIDSFGWANFAKLWIQPSTY

Sequences:

>Translated_586_residues
MIEGSVYMKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFIHNFVE
AIESYTDDLLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPSNGMYDILKIPISRKIFPLDPAFVAVTTESHLTS
QIFDTLVVYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDVYFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIET
PSPLQIRFHLAKPNLFFLHYVSSMQLAILPRDTSIQNHHYIGTGPFKLAHYSEDNIVLEAFTHYFKERALLDRIEFWGIP
DHVQIDADYELPNEEENERHDIQIEEIGCIYASFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPDRS
RLATRRSYSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFPVSDYIDRSIDKHADIIFMG
EVFAANHEIAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHIILFNYHVLKRKTYP
SSLKNVTIDSFGWANFAKLWIQPSTY
>Mature_586_residues
MIEGSVYMKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISWTPGRGRGNKTEILFIHNFVE
AIESYTDDLLAQEKLKDVFLLLKEPLPPALQKKIENKLHHHFGYEPSNGMYDILKIPISRKIFPLDPAFVAVTTESHLTS
QIFDTLVVYNDVTEKMEPHIAHTWELSEDGLTWTFYLRKDVYFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIET
PSPLQIRFHLAKPNLFFLHYVSSMQLAILPRDTSIQNHHYIGTGPFKLAHYSEDNIVLEAFTHYFKERALLDRIEFWGIP
DHVQIDADYELPNEEENERHDIQIEEIGCIYASFNFTKPGPHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPDRS
RLATRRSYSLEKAKEYLKKSTYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFPVSDYIDRSIDKHADIIFMG
EVFAANHEIAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEFLQAEHIILFNYHVLKRKTYP
SSLKNVTIDSFGWANFAKLWIQPSTY

Specific function: Unknown

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=351, Percent_Identity=26.7806267806268, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1786650, Length=575, Percent_Identity=23.4782608695652, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1789966, Length=390, Percent_Identity=23.5897435897436, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69304; Mature: 69304

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEGSVYMKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISW
CCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEE
TPGRGRGNKTEILFIHNFVEAIESYTDDLLAQEKLKDVFLLLKEPLPPALQKKIENKLHH
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HFGYEPSNGMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLVVYNDVTEKMEPHI
HCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
AHTWELSEDGLTWTFYLRKDVYFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIET
EEEEEECCCCCEEEEEEEEEEEEECCEEEECCCHHHHHHHHHHHHCHHHHHHHHHEECCC
PSPLQIRFHLAKPNLFFLHYVSSMQLAILPRDTSIQNHHYIGTGPFKLAHYSEDNIVLEA
CCCEEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCEEEEEECCCCCHHHH
FTHYFKERALLDRIEFWGIPDHVQIDADYELPNEEENERHDIQIEEIGCIYASFNFTKPG
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCC
PHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPDRSRLATRRSYSLEKAKEYLKKS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHC
TYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFPVSDYIDRSIDKHADIIFMG
CCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEE
EVFAANHEIAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEF
EEEECCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQAEHIILFNYHVLKRKTYPSSLKNVTIDSFGWANFAKLWIQPSTY
HCCCEEEEEEEEEEECCCCCCHHCCCEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MIEGSVYMKIMDYYIRLRLHAQDQQHMRNSLQELADVLYCSTKNVKILLKKMSEEQLISW
CCCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEE
TPGRGRGNKTEILFIHNFVEAIESYTDDLLAQEKLKDVFLLLKEPLPPALQKKIENKLHH
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HFGYEPSNGMYDILKIPISRKIFPLDPAFVAVTTESHLTSQIFDTLVVYNDVTEKMEPHI
HCCCCCCCCCEEEEECCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
AHTWELSEDGLTWTFYLRKDVYFHNETVLTSKDVQFSFERLKEVHSPFEWLTEEIVQIET
EEEEEECCCCCEEEEEEEEEEEEECCEEEECCCHHHHHHHHHHHHCHHHHHHHHHEECCC
PSPLQIRFHLAKPNLFFLHYVSSMQLAILPRDTSIQNHHYIGTGPFKLAHYSEDNIVLEA
CCCEEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCEEECCCCEEEEEECCCCCHHHH
FTHYFKERALLDRIEFWGIPDHVQIDADYELPNEEENERHDIQIEEIGCIYASFNFTKPG
HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCC
PHHDIYFRKAWRELYDVETILRSIEGRRTIAASSFFPDRSRLATRRSYSLEKAKEYLKKS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHC
TYNGETIHIYFFAFKDSANDAYFLKERCESLGIQVELHPFPVSDYIDRSIDKHADIIFMG
CCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCEEEEE
EVFAANHEIAFLNVFKNKSCFVNRFMDPHYEKQINCLLDTFLLEENKEKRYELMYEIEEF
EEEECCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQAEHIILFNYHVLKRKTYPSSLKNVTIDSFGWANFAKLWIQPSTY
HCCCEEEEEEEEEEECCCCCCHHCCCEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]