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The map label for this gene is gerIA [H]

Identifier: 218234237

GI number: 218234237

Start: 792486

End: 794003

Strand: Reverse

Name: gerIA [H]

Synonym: BCB4264_A0819

Alternate gene names: 218234237

Gene position: 794003-792486 (Counterclockwise)

Preceding gene: 218230915

Following gene: 218232447

Centisome position: 14.65

GC content: 35.05

Gene sequence:

>1518_bases
ATGTTCGGTTTATCATCTAAAAAATCAAAAAAGACTAATACAAAAACACTTTGTTCTATCCCAGAATTTATACAAACCAT
GAAAGAATCAAGCGATTTTGTCTCTTATAACATACTTAAAGATGAAACGTTGTGCTTGTTTTATTATAAATCTGTCGTGG
AAGCACTTATTATTAAACAATTCATTTTAACTCCTCTAAAAAAGGAATCCGACCAAATCCAAAACATCTCTGATTTATGT
AATATCATCTCTATTGAAGACATTATTACCTCCCCTTCTATTGATGATATTCGTGAAAAATTATTAGGTGGATATATTTT
AATACGCTTAAAAAACAATTCGAATCCTGATCAATATGCTTTAATTCGTGCCGAAAGTACTGTTTTAGGAAAACGATTAT
ATAACGATACAGAAAATGAGTATAGCGTAATCGGACCTAAAATCGGTTTCGTTGAAAACCTTGATACAAATATCCACTTA
TTACGCCGAAATATCGTAACGGAGCAACTCATTTTTAAAGAAGTTACCGTCGGATCTATATCAAAAACGAAAGTAGCAGT
TGCTTATATAGAAGGAATTACAAATGAACAATTTGTCAACACCGCAATTCAACGGCTAGAAGACATTGACTTTGATGTCC
CATTTGATTCAACTATGATTGAGCAATTTATTAGTGATAATAGCAATTCACCTTTTCCTGTTCTATTACCTACAGAACGA
TTAGATCGAGCTGTATTTGCATTAATTAATGGGGAAGTTTTAATCTTAACAGATGGCTCTCCATATGCTTTATCAGGACC
AACAACGTTACTGGATTTTTTCATTTCACCAGAAGATTATTATTTACCGTGGATGATTGGATCGTTCTTTCGTATTATTC
GTTTTTTCGGAGCTATATTTTCTCTTTTTTCCTCCGCTATTTATACAGCGGCTTTAACATATCATTATCAAATGATCCCT
GCCGATTTACTAGGTCCTATTATTTTCTCGAGAGCTAACGTACCTTTCCCTCCTATTCTAGAAGCACTCTTTTTAGAAAT
TACAATTGAATTGCTCCGTGAAGCTGGAGCGCGTTTACCGACAAAAGTCGGACAAACAATCGGGATTGTTGGGGGGATTG
TAATTGGCCAAGCATCCGTGGAGGCAGCTTTGACAAGTACAATTTTATTAATTGCAGTTGCTTTATCCGCTCTTGCATCT
TTCACAACACCAACAGTAAAGATGTCTTCTACTATCCGGTTGTTACGCTTTCCGCTTATTCTTTTAGCCGGTGCATTCGG
AGGATTAGGCCTCGCTGTCGGATTTGTATTTATTTTAGCTCATTTAATTAAATTAAAATCGCTTGGATCACCTTATTTGT
TACCTTTATATCCATTTCGTGGTTTAGGTACAGCAGAAGGTTTTCTTCGATTACCATTTAGTCAAACGGCACAAAGACCT
TCTTTTCTTAGACCAAAATCAAAATGGCGCTACAATCCAAACAAATCGAAGCAAAAACGTGATGGTGAGAATGAATGA

Upstream 100 bases:

>100_bases
CCACTCTTCCTTTTCTTTATGAACTTTCAATTTTTAAGTATAAATTCCCGTCTTTCCCAAAAACTAACACAAGTAAATGA
TATATGTTAGGGGTGAGAAA

Downstream 100 bases:

>100_bases
AGAAAATTTTATTGCACCTTATTATCATTATCTTCTTCATTTTACAAACTGGCTGTACACAAACGTATATAGTGGATACG
CAGCGTATTATTCATGTCGC

Product: spore germination protein, GerA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MFGLSSKKSKKTNTKTLCSIPEFIQTMKESSDFVSYNILKDETLCLFYYKSVVEALIIKQFILTPLKKESDQIQNISDLC
NIISIEDIITSPSIDDIREKLLGGYILIRLKNNSNPDQYALIRAESTVLGKRLYNDTENEYSVIGPKIGFVENLDTNIHL
LRRNIVTEQLIFKEVTVGSISKTKVAVAYIEGITNEQFVNTAIQRLEDIDFDVPFDSTMIEQFISDNSNSPFPVLLPTER
LDRAVFALINGEVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIFSLFSSAIYTAALTYHYQMIP
ADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALAS
FTTPTVKMSSTIRLLRFPLILLAGAFGGLGLAVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
SFLRPKSKWRYNPNKSKQKRDGENE

Sequences:

>Translated_505_residues
MFGLSSKKSKKTNTKTLCSIPEFIQTMKESSDFVSYNILKDETLCLFYYKSVVEALIIKQFILTPLKKESDQIQNISDLC
NIISIEDIITSPSIDDIREKLLGGYILIRLKNNSNPDQYALIRAESTVLGKRLYNDTENEYSVIGPKIGFVENLDTNIHL
LRRNIVTEQLIFKEVTVGSISKTKVAVAYIEGITNEQFVNTAIQRLEDIDFDVPFDSTMIEQFISDNSNSPFPVLLPTER
LDRAVFALINGEVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIFSLFSSAIYTAALTYHYQMIP
ADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALAS
FTTPTVKMSSTIRLLRFPLILLAGAFGGLGLAVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
SFLRPKSKWRYNPNKSKQKRDGENE
>Mature_505_residues
MFGLSSKKSKKTNTKTLCSIPEFIQTMKESSDFVSYNILKDETLCLFYYKSVVEALIIKQFILTPLKKESDQIQNISDLC
NIISIEDIITSPSIDDIREKLLGGYILIRLKNNSNPDQYALIRAESTVLGKRLYNDTENEYSVIGPKIGFVENLDTNIHL
LRRNIVTEQLIFKEVTVGSISKTKVAVAYIEGITNEQFVNTAIQRLEDIDFDVPFDSTMIEQFISDNSNSPFPVLLPTER
LDRAVFALINGEVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIFSLFSSAIYTAALTYHYQMIP
ADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLPTKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALAS
FTTPTVKMSSTIRLLRFPLILLAGAFGGLGLAVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
SFLRPKSKWRYNPNKSKQKRDGENE

Specific function: Required for inosine germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 56236; Mature: 56236

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLSSKKSKKTNTKTLCSIPEFIQTMKESSDFVSYNILKDETLCLFYYKSVVEALIIKQ
CCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
FILTPLKKESDQIQNISDLCNIISIEDIITSPSIDDIREKLLGGYILIRLKNNSNPDQYA
HHHCHHCCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCEE
LIRAESTVLGKRLYNDTENEYSVIGPKIGFVENLDTNIHLLRRNIVTEQLIFKEVTVGSI
EEEEHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
SKTKVAVAYIEGITNEQFVNTAIQRLEDIDFDVPFDSTMIEQFISDNSNSPFPVLLPTER
CHHHEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECHHH
LDRAVFALINGEVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIF
HHHHHHHHCCCCEEEEECCCCCEECCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
SLFSSAIYTAALTYHYQMIPADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTPTVKMSSTIRLLRFPLI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
LLAGAFGGLGLAVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCHHHCCCC
SFLRPKSKWRYNPNKSKQKRDGENE
CCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MFGLSSKKSKKTNTKTLCSIPEFIQTMKESSDFVSYNILKDETLCLFYYKSVVEALIIKQ
CCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
FILTPLKKESDQIQNISDLCNIISIEDIITSPSIDDIREKLLGGYILIRLKNNSNPDQYA
HHHCHHCCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCCEE
LIRAESTVLGKRLYNDTENEYSVIGPKIGFVENLDTNIHLLRRNIVTEQLIFKEVTVGSI
EEEEHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
SKTKVAVAYIEGITNEQFVNTAIQRLEDIDFDVPFDSTMIEQFISDNSNSPFPVLLPTER
CHHHEEEHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECHHH
LDRAVFALINGEVLILTDGSPYALSGPTTLLDFFISPEDYYLPWMIGSFFRIIRFFGAIF
HHHHHHHHCCCCEEEEECCCCCEECCCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
SLFSSAIYTAALTYHYQMIPADLLGPIIFSRANVPFPPILEALFLEITIELLREAGARLP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TKVGQTIGIVGGIVIGQASVEAALTSTILLIAVALSALASFTTPTVKMSSTIRLLRFPLI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
LLAGAFGGLGLAVGFVFILAHLIKLKSLGSPYLLPLYPFRGLGTAEGFLRLPFSQTAQRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEECCCHHHCCCC
SFLRPKSKWRYNPNKSKQKRDGENE
CCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9852021 [H]