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The map label for this gene is dhaS [H]

Identifier: 218232133

GI number: 218232133

Start: 987667

End: 988233

Strand: Reverse

Name: dhaS [H]

Synonym: BCB4264_A1007

Alternate gene names: 218232133

Gene position: 988233-987667 (Counterclockwise)

Preceding gene: 218235106

Following gene: 218234474

Centisome position: 18.24

GC content: 29.1

Gene sequence:

>567_bases
ATGACCTCTTCTATAATTTCTAAAAAGATAATCGCAAACTCATTGAAGTATTTAATGGAAACAGAGTCGTTTCATAAAAT
ATCAGTGAGCGATATTATGTTACACTGTCAAATGCGTAGGCAAACTTTTTATTATCATTTTAAAGATAAATTTGAACTAT
TAAGCTGGATTTATAGAGAAGAAACGAAAGAAAATATTATAGACTTTCTCGATTATGAAAAATGGGAAAACATTTTCGAT
TTATTATTTGATTACTTTTATGAAAATCAAAAATTTTACCGAAATGCTTTTAAAGTCATTGAGCAAAACTCGTTTAATCA
CTATTTATTTGAGCATACGAAAAACTTATATATGAAGATTATTGATGAATTATCTGTGAGCTGTGGATTCAGCCTTTCTG
ATGAGACAAAAAATACGATTGCCTCCTTTTATAGTCACGGCTTCGTTGGAACGATAAAAGATTGGATTGAAAGTAAGTGC
GAAGTAGATCCATCCGTTATGTCTTCTCTTATGAAAAATATGATAAACAATCAATTACTACTATTACTTGAGCAATCAGC
AAAGTAA

Upstream 100 bases:

>100_bases
CGTTTTATAGTAAACGGACAAAATGGACAATCTGTCTAAAGACACCGCTCTCATTTATAGATAGGATTTTTATATTACTA
ACATTCTAGGGATGATTCAG

Downstream 100 bases:

>100_bases
TTAAAGGGTGGCAAAAGCAATGAAAAAGATTATGAATGATGTACAAAATATCGTTCAAGATATGCTGCACGGCTTTTATT
TTGAACATAACGACAAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYREETKENIIDFLDYEKWENIFD
LLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKC
EVDPSVMSSLMKNMINNQLLLLLEQSAK

Sequences:

>Translated_188_residues
MTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYREETKENIIDFLDYEKWENIFD
LLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKC
EVDPSVMSSLMKNMINNQLLLLLEQSAK
>Mature_187_residues
TSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYREETKENIIDFLDYEKWENIFDL
LFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKIIDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKCE
VDPSVMSSLMKNMINNQLLLLLEQSAK

Specific function: In complex with dhaQ, upon activation by dihydroxyacetone, activates transcription of the dhaKLM operon. Binds the inverted repeat sequence 5'-GGACACATN(6)ATTTGTCC-3' located upstream of and partially overlapping with the -35 promoter sequence of the dhaK

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR012738
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22578; Mature: 22447

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYRE
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETKENIIDFLDYEKWENIFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKCEVDPSVMSSLMKNMINNQLL
HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHE
LLLEQSAK
EHEECCCC
>Mature Secondary Structure 
TSSIISKKIIANSLKYLMETESFHKISVSDIMLHCQMRRQTFYYHFKDKFELLSWIYRE
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETKENIIDFLDYEKWENIFDLLFDYFYENQKFYRNAFKVIEQNSFNHYLFEHTKNLYMKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IDELSVSCGFSLSDETKNTIASFYSHGFVGTIKDWIESKCEVDPSVMSSLMKNMINNQLL
HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHE
LLLEQSAK
EHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]