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The map label for this gene is yocH [H]

Identifier: 218231464

GI number: 218231464

Start: 820428

End: 821696

Strand: Reverse

Name: yocH [H]

Synonym: BCB4264_A0849

Alternate gene names: 218231464

Gene position: 821696-820428 (Counterclockwise)

Preceding gene: 218232854

Following gene: 218233343

Centisome position: 15.16

GC content: 40.82

Gene sequence:

>1269_bases
ATGAAAAAATTTATGGGTATAGCAACAGCAGCGGTTTTTGGTCTTGGGATTTTCACAACATCTGCTAAAGCAGAAACAAT
CGTAACGACTGACGTACTAAACGTACGAGAAAACCCAACTACTGAATCAAAAGTTGTAGGAAAATTATTAGATGGATATA
AAGTAAATGTTTTACATACAGAAAATGGTTGGTCAAAAGTTCAATTGAATAGCGGTAAAGAAGCTTTCATAAGCGCTGAC
TATACAAAAGACACTTACTACGTAACAGCAAACGTATTAAACGTACGTGCTGGGGCAAACACAGACTCAGAGATTCTTGG
TAAGTTGAAAAAAGATGATGTAATTGAAACAACACACCAAGTACAAAATGATTGGATTCAATTTGAATATAACGGAAAAA
CAGCTTATGTTCATGTTCCTTACTTAACAGGTAAAGCACCAGTTAAAGTTCAACCAGTAGCTAAAGTTGAAAAAACGACT
ACAGTTCAAGATACAGCTAAAGTTCGTGAAGCAGCTAAAGCTCCGGAAGTAGCTGAAACTCAAGCAAAAGCTAAAGCAGT
GGAAGCAACTAAAGCTCGCGAAGCAGCTGAAGCTCAAGCAGAAGTTAAAGCTCAAGAAGCGGCTAAAGCTCGTGAAGCAG
CTAAGGCTCAAGAAGCAGCTAAAGCTCAGGCAGATGCTGAAGCTCAAGCAGAAGTTAAAGCTCAAGAGGCAGCTAAAGCT
CGTGAAGCAGCTAAAGCTCAAGCAGATGCTGAAGCTCAAGCAGCGGCTAAGGCTCAAGAAGCAGCTAAAGCTCGTGAAGC
AGCTAAAGCTCAAGAGGCAGCTGAAGCTCGTGAAGCAGCTAAGGCTCAAGAAGCAGCTGAAGCTCGTGAAGCGGCTAAGG
CTCAAGAAGCGGCTAAAGCTAAAAAACCAGCTACACAACAACCTGTTGCAAAAGAAACTGAAACAAGTGCACCATCATCT
TCTCGTGAGTTACGTGTTGTAGCAACAGCTTACACAGCAGATCCACTTGAAAATGGTTATAAAGCAGGCGACCAAGTAAA
ATCAGCTTTAGGCCACAACTTAACAGCTAATCCAAACATGAAACTAATTGCAGTTGATCCAAGTGTCATTCCATTAGGTT
CAAAAGTATGGGTTGAAGGTTACGGAGTAGCAATCGCTGGTGATACTGGTGGAGCTATTAAAGGTAATAAAATCGACGTT
TTAATGCCAGATAAAGGTTCATCAAGTAGCTGGGGACGTAAAACAGTTACAGTTAAAGTATTAAACTAG

Upstream 100 bases:

>100_bases
TGCCCCATTACGAAAGCTTTGTAATTTTATGTTTTTCGCAAATAAGAAAATAATGGTTGCTATAATGAGGTCAACGAAAA
CAAATGCAATGGAGGCTATT

Downstream 100 bases:

>100_bases
TTATAAAAAAGAGCCAGTCTCATCGTTGAGACTGGCTCTTTTTTTACTCTATTAAACTACTGAAAAATAACATAGTAAAT
GAAATTATATCAACGATTTT

Product: enterotoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHTENGWSKVQLNSGKEAFISAD
YTKDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAPVKVQPVAKVEKTT
TVQDTAKVREAAKAPEVAETQAKAKAVEATKAREAAEAQAEVKAQEAAKAREAAKAQEAAKAQADAEAQAEVKAQEAAKA
REAAKAQADAEAQAAAKAQEAAKAREAAKAQEAAEAREAAKAQEAAEAREAAKAQEAAKAKKPATQQPVAKETETSAPSS
SRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDV
LMPDKGSSSSWGRKTVTVKVLN

Sequences:

>Translated_422_residues
MKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHTENGWSKVQLNSGKEAFISAD
YTKDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAPVKVQPVAKVEKTT
TVQDTAKVREAAKAPEVAETQAKAKAVEATKAREAAEAQAEVKAQEAAKAREAAKAQEAAKAQADAEAQAEVKAQEAAKA
REAAKAQADAEAQAAAKAQEAAKAREAAKAQEAAEAREAAKAQEAAEAREAAKAQEAAKAKKPATQQPVAKETETSAPSS
SRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDV
LMPDKGSSSSWGRKTVTVKVLN
>Mature_422_residues
MKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHTENGWSKVQLNSGKEAFISAD
YTKDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKAPVKVQPVAKVEKTT
TVQDTAKVREAAKAPEVAETQAKAKAVEATKAREAAEAQAEVKAQEAAKAREAAKAQEAAKAQADAEAQAEVKAQEAAKA
REAAKAQADAEAQAAAKAQEAAKAREAAKAQEAAEAREAAKAQEAAEAREAAKAQEAAKAKKPATQQPVAKETETSAPSS
SRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNMKLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDV
LMPDKGSSSSWGRKTVTVKVLN

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall. Note=Released into the medium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF06725 3D; PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 44487; Mature: 44487

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHT
CCHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEEE
ENGWSKVQLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQ
CCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHH
VQNDWIQFEYNGKTAYVHVPYLTGKAPVKVQPVAKVEKTTTVQDTAKVREAAKAPEVAET
HCCCEEEEEECCEEEEEEEEEECCCCCEEECCCHHHHHHCCHHHHHHHHHHHCCCCHHHH
QAKAKAVEATKAREAAEAQAEVKAQEAAKAREAAKAQEAAKAQADAEAQAEVKAQEAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
REAAKAQADAEAQAAAKAQEAAKAREAAKAQEAAEAREAAKAQEAAEAREAAKAQEAAKA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKPATQQPVAKETETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNM
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCHHHHHHHHCCCCCCCCCE
KLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGSSSSWGRKTVTVKV
EEEEECCCEEECCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEE
LN
EC
>Mature Secondary Structure
MKKFMGIATAAVFGLGIFTTSAKAETIVTTDVLNVRENPTTESKVVGKLLDGYKVNVLHT
CCHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEEE
ENGWSKVQLNSGKEAFISADYTKDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQ
CCCCEEEEECCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCHHHHHHHCCCHHHHHHHH
VQNDWIQFEYNGKTAYVHVPYLTGKAPVKVQPVAKVEKTTTVQDTAKVREAAKAPEVAET
HCCCEEEEEECCEEEEEEEEEECCCCCEEECCCHHHHHHCCHHHHHHHHHHHCCCCHHHH
QAKAKAVEATKAREAAEAQAEVKAQEAAKAREAAKAQEAAKAQADAEAQAEVKAQEAAKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
REAAKAQADAEAQAAAKAQEAAKAREAAKAQEAAEAREAAKAQEAAEAREAAKAQEAAKA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKPATQQPVAKETETSAPSSSRELRVVATAYTADPLENGYKAGDQVKSALGHNLTANPNM
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHCCCCHHHHHHHHCCCCCCCCCE
KLIAVDPSVIPLGSKVWVEGYGVAIAGDTGGAIKGNKIDVLMPDKGSSSSWGRKTVTVKV
EEEEECCCEEECCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEE
LN
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]