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The map label for this gene is ytfH [C]

Identifier: 218231300

GI number: 218231300

Start: 854989

End: 855327

Strand: Reverse

Name: ytfH [C]

Synonym: BCB4264_A0891

Alternate gene names: 218231300

Gene position: 855327-854989 (Counterclockwise)

Preceding gene: 218233730

Following gene: 218231046

Centisome position: 15.78

GC content: 33.63

Gene sequence:

>339_bases
ATGAACAATATAGATCCAGTTGAATTAACGAAAGGTTTACCTGGCATACCTTGTCCTATCGCTAAAACGCTTGATGTAAT
TAGTACAAAATGGACGTTTTTAATCATTCGTGATCTTCTTATCGAAGGAACATTACGCTTTAGTGATTTACAAAAATCAA
TGAATGGGATTAGTCCAAAAACATTATCGCTTCGACTAAAAGAATTAGAGTCTCAAGGCATTATAACGAGAAAAATATAT
CCAGAAGTTCCGCCTCGTGTAGAGTACACATTAACGGATAAAGGAAAGCAATTAGAGGGGATTTTTATTGAATTAAAACG
GTTTGGGTTAAGTTTATAA

Upstream 100 bases:

>100_bases
TATGGAAGTAGTGATATTTTTTTCATATAGTTACCAAAAGTATAGTTTTGTGATACTATAAAGCAAATTCATCAAAAAAA
ATTTTATGGAGGCTAGTTCC

Downstream 100 bases:

>100_bases
AACAAAAACCCCTTACAGTCGTAAGGGGCTTCATTACTTCGCAAAACTTTCAGCCAACTGTTTCTCTCTCCACATAAATG
TAATAGCGAGACCAACTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNNIDPVELTKGLPGIPCPIAKTLDVISTKWTFLIIRDLLIEGTLRFSDLQKSMNGISPKTLSLRLKELESQGIITRKIY
PEVPPRVEYTLTDKGKQLEGIFIELKRFGLSL

Sequences:

>Translated_112_residues
MNNIDPVELTKGLPGIPCPIAKTLDVISTKWTFLIIRDLLIEGTLRFSDLQKSMNGISPKTLSLRLKELESQGIITRKIY
PEVPPRVEYTLTDKGKQLEGIFIELKRFGLSL
>Mature_112_residues
MNNIDPVELTKGLPGIPCPIAKTLDVISTKWTFLIIRDLLIEGTLRFSDLQKSMNGISPKTLSLRLKELESQGIITRKIY
PEVPPRVEYTLTDKGKQLEGIFIELKRFGLSL

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=81, Percent_Identity=44.4444444444444, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12654; Mature: 12654

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIDPVELTKGLPGIPCPIAKTLDVISTKWTFLIIRDLLIEGTLRFSDLQKSMNGISPK
CCCCCCHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCH
TLSLRLKELESQGIITRKIYPEVPPRVEYTLTDKGKQLEGIFIELKRFGLSL
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNIDPVELTKGLPGIPCPIAKTLDVISTKWTFLIIRDLLIEGTLRFSDLQKSMNGISPK
CCCCCCHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCH
TLSLRLKELESQGIITRKIYPEVPPRVEYTLTDKGKQLEGIFIELKRFGLSL
HHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]