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The map label for this gene is yciK [C]

Identifier: 218231046

GI number: 218231046

Start: 850469

End: 851239

Strand: Reverse

Name: yciK [C]

Synonym: BCB4264_A0885

Alternate gene names: 218231046

Gene position: 851239-850469 (Counterclockwise)

Preceding gene: 218231300

Following gene: 218232824

Centisome position: 15.71

GC content: 35.93

Gene sequence:

>771_bases
ATGAAATACACTGTTATTACTGGCGCAAGTTCCGGAATTGGTTATGAAGCAGCTTTAGCATTTGCATCTCGCGGAAAAAA
TTTAGTACTTGTAGCTCGAAGACAAGAAGAATTAAACGAATTAAAATTGAAAATTAACGAAATGCATCCAGAATTGGATG
TTGTCATTCGAAGAACTGATTTATCTGTTACTGAAGATGTTTATAAACTTTATGAAAGCCTACAATCTTTTCAAATTGAA
ACGTGGATTAACAACGCAGGTTTTGGTAATTTCGCCTCAATTGCTGAACAAAATTTAAATAAAATCGAGACGATGTTGCA
TGTCAATATAGAAGCACTAACAATACTCTCTTCTCTTTTCGTTCGAGATTATTCAAAGGTTGACGGAACACAGCTTATTA
ACGTTTCATCGGGCGGCGGATACACGATTGTTGCTGATGCTGTTACGTATTGCGCTACGAAATTCTATGTAAGTGCATTT
ACAGAAGGGCTGTCTCACGAACTGAAAGAACAAGGCGCAAAACTGCAAGCAAAAGTTTTAGCTCCTGCTGCAACTGAAAC
AGAATTTGCGAAGCGTTCATTTGATATTGATGAATTCCAATACGATAATGTTGTACCAAAATTCCACACTGCAAAACAAA
TGGCACAATTTATGCTCGATCTTTATGATAGCGATAAAGTTGTAGGGCTTGTCGATGGTTCTACTTATAACTATGAACTT
AAAAACCCCATTTTTAAGTTTGCAGTAAGAAAAACGAATTCAAGTTCTTAA

Upstream 100 bases:

>100_bases
TATGACCTTATCAAATTTATAAAAAACATTTGACTTAGAGTATACTCTAACAAATACAATCTAACCATAATAAATTCATT
TGAACTTAGGGGGATTTTAT

Downstream 100 bases:

>100_bases
TTTCCCCTAAAACATAGATGCCCACTATTACGTAAATAATAGTGGGACTTTTTCTGTCTGAAAAATTCACCCAACATACC
GAATCATCGCAACCTCATCA

Product: oxidoreductase, short-chain dehydrogenase/reductase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKYTVITGASSGIGYEAALAFASRGKNLVLVARRQEELNELKLKINEMHPELDVVIRRTDLSVTEDVYKLYESLQSFQIE
TWINNAGFGNFASIAEQNLNKIETMLHVNIEALTILSSLFVRDYSKVDGTQLINVSSGGGYTIVADAVTYCATKFYVSAF
TEGLSHELKEQGAKLQAKVLAPAATETEFAKRSFDIDEFQYDNVVPKFHTAKQMAQFMLDLYDSDKVVGLVDGSTYNYEL
KNPIFKFAVRKTNSSS

Sequences:

>Translated_256_residues
MKYTVITGASSGIGYEAALAFASRGKNLVLVARRQEELNELKLKINEMHPELDVVIRRTDLSVTEDVYKLYESLQSFQIE
TWINNAGFGNFASIAEQNLNKIETMLHVNIEALTILSSLFVRDYSKVDGTQLINVSSGGGYTIVADAVTYCATKFYVSAF
TEGLSHELKEQGAKLQAKVLAPAATETEFAKRSFDIDEFQYDNVVPKFHTAKQMAQFMLDLYDSDKVVGLVDGSTYNYEL
KNPIFKFAVRKTNSSS
>Mature_256_residues
MKYTVITGASSGIGYEAALAFASRGKNLVLVARRQEELNELKLKINEMHPELDVVIRRTDLSVTEDVYKLYESLQSFQIE
TWINNAGFGNFASIAEQNLNKIETMLHVNIEALTILSSLFVRDYSKVDGTQLINVSSGGGYTIVADAVTYCATKFYVSAF
TEGLSHELKEQGAKLQAKVLAPAATETEFAKRSFDIDEFQYDNVVPKFHTAKQMAQFMLDLYDSDKVVGLVDGSTYNYEL
KNPIFKFAVRKTNSSS

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=202, Percent_Identity=30.6930693069307, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4557649, Length=195, Percent_Identity=29.7435897435897, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI7705855, Length=197, Percent_Identity=26.9035532994924, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787526, Length=208, Percent_Identity=25.9615384615385, Blast_Score=75, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17557668, Length=194, Percent_Identity=29.8969072164948, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=219, Percent_Identity=28.310502283105, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25152911, Length=195, Percent_Identity=29.7435897435897, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17559552, Length=195, Percent_Identity=29.7435897435897, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=220, Percent_Identity=29.0909090909091, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560176, Length=197, Percent_Identity=29.9492385786802, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=196, Percent_Identity=25, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI212646214, Length=197, Percent_Identity=27.4111675126904, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=212, Percent_Identity=33.4905660377358, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6319635, Length=186, Percent_Identity=30.6451612903226, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24580925, Length=197, Percent_Identity=31.9796954314721, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24584752, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24644339, Length=205, Percent_Identity=28.2926829268293, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571526, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21357041, Length=204, Percent_Identity=27.9411764705882, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584748, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161076933, Length=187, Percent_Identity=28.8770053475936, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=27.0408163265306, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI23397609, Length=217, Percent_Identity=25.3456221198157, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28580; Mature: 28580

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYTVITGASSGIGYEAALAFASRGKNLVLVARRQEELNELKLKINEMHPELDVVIRRTD
CEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECC
LSVTEDVYKLYESLQSFQIETWINNAGFGNFASIAEQNLNKIETMLHVNIEALTILSSLF
CCHHHHHHHHHHHHHHEEHEEHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VRDYSKVDGTQLINVSSGGGYTIVADAVTYCATKFYVSAFTEGLSHELKEQGAKLQAKVL
HHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
APAATETEFAKRSFDIDEFQYDNVVPKFHTAKQMAQFMLDLYDSDKVVGLVDGSTYNYEL
CCCCCHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEC
KNPIFKFAVRKTNSSS
CCCCEEHEEECCCCCC
>Mature Secondary Structure
MKYTVITGASSGIGYEAALAFASRGKNLVLVARRQEELNELKLKINEMHPELDVVIRRTD
CEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECC
LSVTEDVYKLYESLQSFQIETWINNAGFGNFASIAEQNLNKIETMLHVNIEALTILSSLF
CCHHHHHHHHHHHHHHEEHEEHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VRDYSKVDGTQLINVSSGGGYTIVADAVTYCATKFYVSAFTEGLSHELKEQGAKLQAKVL
HHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
APAATETEFAKRSFDIDEFQYDNVVPKFHTAKQMAQFMLDLYDSDKVVGLVDGSTYNYEL
CCCCCHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEC
KNPIFKFAVRKTNSSS
CCCCEEHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA