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The map label for this gene is ytfL [C]

Identifier: 213690956

GI number: 213690956

Start: 31432

End: 32775

Strand: Reverse

Name: ytfL [C]

Synonym: Blon_0030

Alternate gene names: 213690956

Gene position: 32775-31432 (Counterclockwise)

Preceding gene: 213690958

Following gene: 213690955

Centisome position: 1.16

GC content: 63.17

Gene sequence:

>1344_bases
ATGTCACTTGGTTTGAACATCCTCCTGATTTTTGTATTTCTCGTTATCGGTTCCGTGTTCTCCGGCACCGAGTTGGCATT
GGTCTCTCTGCGCGGCTCGCAGATCGAGCAAATGGAGCAGGAGGACGCTCGCGGCGCCAAAGTCGCCAAAATCGCACGTG
ACCCGAACACCTTCCTCTCCACCGTGCAGATCGGCGTGACGCTCTCCGGCTTCCTGTCCGCCTCGTTCGGCGCCTCTTCC
ATCGCCCCCTACCTGATTCCGGTGGTCGAAAGCTGGGGTGTGCACCCCGGCATCGCCGGCGGCCTGGTGAACATCATCCT
GACCCTCATCATCTCCTACTGCTCCATCGTTATCTCCGAGATGGTGCCCAAGCGCATCGCCATGCAGCGCACCGAGCAGA
TCGCGCGCGCCGTGGTGCCCGCCATCGACGCCTTCGCCGCCGTCTGCCGCCCGATCATCTGGCTCATCGGCAAGAACACG
AACGGCATCGTCCGCCTGCTCGGCTTCGACCCGCAGCAGACCGAGTCCGAGGTGTCCGACGACGAGCTGCGCGTGCTGGT
CAGCTCCAACACCAACCTCTCCAAGGACGAACGCACGATTCTGGACGATGTGTTCGATGCGTCCGAAACCATCGTCGCCG
AGGTGATGCGCCCGCGCGCCGACGTGGTCTTCATCGAGGGCGACCAGCCCCTGGCCGAGGCCGCCGCGTTCGTACGCGAC
CAGCCGTACTCCCGTTACCCGGTGACCGGCAAGGATTTCGACGACGTGATCGGCTTCGTGCATGTGCGCGATCTGCTGGA
CGTGCGCGATCCGAACGCCAAGATCGTGCGCGATGTGGTGCGCGAAGGCATCTCCCTGCCCGGCACCTCCAAGCTGCTGC
CGAGCCTGGAACTGCTGCGTAAGCGCGGCATCCATCTGGCCGTGGTCATCGACGAGTACGGCGGCACGGACGGCATCGTG
ACGCTTGAGGATATGACTGAGGAGCTTGTGGGCGATATTCGCGATGAGTACGATCTGCCCAGCGAGAAGGGCGGCGAACG
CACCACCCGCACCGCGTTCGTCAATGGCGTGGCCACGATCGAAGCCAGCATGACCATTGAGGACTTCGCCGATCTGACCG
GCATCGAGCTGGAGGACGGCCCGTATGAGACGGTCGCCGGATACTTCCTGTCCAAGACCGGCAAGATGGGTGCGGTGGGT
GACGTGCTGCATTCCGACGACGGCTACAACATGGTCGTCACCAAGGTGGATGGCCGCCGCATCGAAACCATCGAAGTCCG
CAAAGCCGGCGCCCCAGACCATGCGCCACTGCCGGAGGAACCCCAAACCGACGACGCCAACTAA

Upstream 100 bases:

>100_bases
ACGTCAACACACATCACGCCTCACATAGCCAGCGCAGCTAGCAAACCCTGCCCAGCCAGCACACCCCAATTTGACGTGCC
ACTCCCCTAGAGTTAAAGGC

Downstream 100 bases:

>100_bases
CCACATGATATTCACCACCTATTCGTTCAGCCCGGGGCATAACCAAAAATCGTAGAATTATATGGACAGGTTCCACCTAC
AGAAAGAAGGAACATTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSLGLNILLIFVFLVIGSVFSGTELALVSLRGSQIEQMEQEDARGAKVAKIARDPNTFLSTVQIGVTLSGFLSASFGASS
IAPYLIPVVESWGVHPGIAGGLVNIILTLIISYCSIVISEMVPKRIAMQRTEQIARAVVPAIDAFAAVCRPIIWLIGKNT
NGIVRLLGFDPQQTESEVSDDELRVLVSSNTNLSKDERTILDDVFDASETIVAEVMRPRADVVFIEGDQPLAEAAAFVRD
QPYSRYPVTGKDFDDVIGFVHVRDLLDVRDPNAKIVRDVVREGISLPGTSKLLPSLELLRKRGIHLAVVIDEYGGTDGIV
TLEDMTEELVGDIRDEYDLPSEKGGERTTRTAFVNGVATIEASMTIEDFADLTGIELEDGPYETVAGYFLSKTGKMGAVG
DVLHSDDGYNMVVTKVDGRRIETIEVRKAGAPDHAPLPEEPQTDDAN

Sequences:

>Translated_447_residues
MSLGLNILLIFVFLVIGSVFSGTELALVSLRGSQIEQMEQEDARGAKVAKIARDPNTFLSTVQIGVTLSGFLSASFGASS
IAPYLIPVVESWGVHPGIAGGLVNIILTLIISYCSIVISEMVPKRIAMQRTEQIARAVVPAIDAFAAVCRPIIWLIGKNT
NGIVRLLGFDPQQTESEVSDDELRVLVSSNTNLSKDERTILDDVFDASETIVAEVMRPRADVVFIEGDQPLAEAAAFVRD
QPYSRYPVTGKDFDDVIGFVHVRDLLDVRDPNAKIVRDVVREGISLPGTSKLLPSLELLRKRGIHLAVVIDEYGGTDGIV
TLEDMTEELVGDIRDEYDLPSEKGGERTTRTAFVNGVATIEASMTIEDFADLTGIELEDGPYETVAGYFLSKTGKMGAVG
DVLHSDDGYNMVVTKVDGRRIETIEVRKAGAPDHAPLPEEPQTDDAN
>Mature_446_residues
SLGLNILLIFVFLVIGSVFSGTELALVSLRGSQIEQMEQEDARGAKVAKIARDPNTFLSTVQIGVTLSGFLSASFGASSI
APYLIPVVESWGVHPGIAGGLVNIILTLIISYCSIVISEMVPKRIAMQRTEQIARAVVPAIDAFAAVCRPIIWLIGKNTN
GIVRLLGFDPQQTESEVSDDELRVLVSSNTNLSKDERTILDDVFDASETIVAEVMRPRADVVFIEGDQPLAEAAAFVRDQ
PYSRYPVTGKDFDDVIGFVHVRDLLDVRDPNAKIVRDVVREGISLPGTSKLLPSLELLRKRGIHLAVVIDEYGGTDGIVT
LEDMTEELVGDIRDEYDLPSEKGGERTTRTAFVNGVATIEASMTIEDFADLTGIELEDGPYETVAGYFLSKTGKMGAVGD
VLHSDDGYNMVVTKVDGRRIETIEVRKAGAPDHAPLPEEPQTDDAN

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=392, Percent_Identity=27.8061224489796, Blast_Score=181, Evalue=1e-45,
Organism=Escherichia coli, GI1790664, Length=450, Percent_Identity=24, Blast_Score=141, Evalue=1e-34,
Organism=Escherichia coli, GI1786879, Length=285, Percent_Identity=30.1754385964912, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI145693175, Length=320, Percent_Identity=25.3125, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI87082033, Length=285, Percent_Identity=27.3684210526316, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788119, Length=289, Percent_Identity=21.7993079584775, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48477; Mature: 48346

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGLNILLIFVFLVIGSVFSGTELALVSLRGSQIEQMEQEDARGAKVAKIARDPNTFLS
CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHCCCHHHHH
TVQIGVTLSGFLSASFGASSIAPYLIPVVESWGVHPGIAGGLVNIILTLIISYCSIVISE
HHHHCEEHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MVPKRIAMQRTEQIARAVVPAIDAFAAVCRPIIWLIGKNTNGIVRLLGFDPQQTESEVSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCHHCCCC
DELRVLVSSNTNLSKDERTILDDVFDASETIVAEVMRPRADVVFIEGDQPLAEAAAFVRD
CCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHC
QPYSRYPVTGKDFDDVIGFVHVRDLLDVRDPNAKIVRDVVREGISLPGTSKLLPSLELLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KRGIHLAVVIDEYGGTDGIVTLEDMTEELVGDIRDEYDLPSEKGGERTTRTAFVNGVATI
HCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEE
EASMTIEDFADLTGIELEDGPYETVAGYFLSKTGKMGAVGDVLHSDDGYNMVVTKVDGRR
EECCCHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEECCCE
IETIEVRKAGAPDHAPLPEEPQTDDAN
EEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLGLNILLIFVFLVIGSVFSGTELALVSLRGSQIEQMEQEDARGAKVAKIARDPNTFLS
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHCCCHHHHH
TVQIGVTLSGFLSASFGASSIAPYLIPVVESWGVHPGIAGGLVNIILTLIISYCSIVISE
HHHHCEEHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
MVPKRIAMQRTEQIARAVVPAIDAFAAVCRPIIWLIGKNTNGIVRLLGFDPQQTESEVSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCCCHHCCCC
DELRVLVSSNTNLSKDERTILDDVFDASETIVAEVMRPRADVVFIEGDQPLAEAAAFVRD
CCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHC
QPYSRYPVTGKDFDDVIGFVHVRDLLDVRDPNAKIVRDVVREGISLPGTSKLLPSLELLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
KRGIHLAVVIDEYGGTDGIVTLEDMTEELVGDIRDEYDLPSEKGGERTTRTAFVNGVATI
HCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCEEEE
EASMTIEDFADLTGIELEDGPYETVAGYFLSKTGKMGAVGDVLHSDDGYNMVVTKVDGRR
EECCCHHHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEECCCE
IETIEVRKAGAPDHAPLPEEPQTDDAN
EEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]