| Definition | Shewanella piezotolerans WP3 chromosome, complete genome. |
|---|---|
| Accession | NC_011566 |
| Length | 5,396,476 |
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Identifier: 212637146
GI number:
Start: 4651195
End: 4654458
Strand: Reverse
Name: Not Available
Synonym: swp_4441
Alternate gene names: NA
Gene position: NA
Preceding gene: 212637147
Following gene: 212637145
Centisome position: NA
GC content: NA
Gene sequence:
>3264_bases ATGAAAAAAAGTTTCCTATCGCTGGCTATTGCCAGCACAATCAGCATGGGCGCCTTCGCTGGCGTTGAAGACCTGCTGAT CACCGAAATGACCCAAAGTTCTGATGCTAGTGTGGGATCTGTTGAGATCACTAACACTGGTTCTGACGCCTTTACTTTTA CTGCTGACATTACCGCTTTCCAACGCTCTAGCGGTAAGTACGACAATGAGTTGCTTAACGCTGATGCTAAGCCATTGTTG ACCGGCGAAACGCTTGCTGCTGGTGCTTCTCTAGTGCTAGTCAATAGTCGAGCGACCGAAGAGTTTCGCAATGCGATTGA GACTCAAGGTGGCACAGTTGTAATCTCCACATATGACAGCAGTAACAAGTACAATAACTTGTACATGACCAGTGATGACG GTTTTTTCCTGAAAAATGGTGATACCGTTATCGATCGTGTTGGCGCTGTGAACGACAATAGCAAGTGGGCGCCTAACACC ACTTTGCGTCGCAAGAAAACTGCTGATGGCAACAATCCTGCTCAATCAGGAACTTTCGATGCGACTCAGTGGCAGAACAT TTTACCAATGCGGTTTGATGATCTAGGTAAGTCAGAGCTACCTGCTGCTGATGCAGAAGACATCATGGACATCTTCACTT GTCCAACTGATAAGAATGAGATCATGTCTCCTAGCGAAGTTCAAGGCACAGGCTTTACCTCGCCTCTGATTGCTGCTGGT GAAACGGAATCCGCTGAGAAAATTGCTGTAGAGGGGATTATTTCCGCTAAGGTGTCTATCCCTAACGAGGGGTTCTATCT TCGCAATTTTGCCCCTGATAACAACCCAGAGACCTCCGATGGCATCTTCGTTAGTACAAGTGCAGCAGGTGATCTTAAGG TTGGTCAAACTATTTGTATCGGCAGTAAAGTTGTTGAGTTTGAAGGCCAGACACAGCTATCGGCCGATACAGCATTTGGC TGGAACGTTACTGATACTAATATCGTAACCGAGCCAACGGATATTCAGGTCATCAGCTCAGACAATGGTTCTTTCGATAA GACCTTAGAGCGTTACGAAGGTATGTTGGTTAATTTGCCGGAGGATTTGGACCCTAGTACTCCTAGCGAAGAAGCTAAAG AGGATATGCGTATTACTCGCAGCTTCAGCTACAACTATCTTTTAAGTAGCAAAGGGCATAACCGTAACAACATGGTTGCT GCTTATAAGCGTCCTAACTTGCAGCCTAACCATTTGCATGTTGCCGGAAGCCCTGAGTCGAAGGCGGCTTATGAGCAAAA CAATGACTATCGTTTAGTGATTGAAAGCTCGCCTAAATCAGGCGGTACAGATTTACCTTATTACGCTGGCTTTAACAGTG ATCCACACACTAACTATATCCGTATCGACGATAGCCTCGTTAACGCGCAAGGTGTGATCAGCCAATATGAAACTGAGTTG ATCCCAGGAACGGATAAGTTTGATCAGGACTACAGCCTGACTATAACCAACCAGTTGACTAGCGACAACTTCATCCACAA CTTACCGCGTACTGATGAACCGGATTTGAATGACACTGTGGCGGAAGATGATTTTGCTATCCGCATTTCTAGTCAAAACC TGTTTAACTTCTTTAACTCTCCTTTTGGTGGCGACAATAACAACTTTGGTCAGAGCCGAGGCGCAGACAGCTACGATGAA TACATTAACCAGAGAACTAAGCTGGTAGAAATTATTCGTGCTCAGGATGCTGATGTCATGGCCCTAATGGAGATTGAGAA TAACGGGTTTGGCGATGCCAGTGCGATTGCTGAGATTGTTAACCAGGTCAATGTCCAGTATGTGGATGAGCGAGCACAAG ACTATAACGGTCCTAACTCAACAGAGAACCGTTATGTGTTTGTTGGTTTTGACAATAATGGTAATCAAATGCTGGATAAC CTAGACGCTATTGGTTCTGATGCCATTGCGACAGGTATCATATATCGCCCAAGCAAGATGAGCATTGAACGTACTCGCGT TATTCCTATGCCTCAGCAGAAAGCACCCACCATAGTGAATGACTTAGGTGAGGTGATCAAAGATCAGAATCAGGAAATTC TAGAGAACGGTCAGAACTACCACCGTGACGCTCTGGTTGTAACCTTTATCGTTAACCAAACAGGCAAGCGCCTGACGCTA GCTGTAAATCACCTTAAGTCAAAAGGCTCTACTTGTTGGGAAGAGTGGCAAGGTGTTGAGTTTGGCAATGCCACGACTTG GAACAACCGTACTGCACCAGATCTGGACTACCAAGGGTCTTGTGCCGAGTTCCGCGTAGCTGGCGCCGTACACTTAGGTG AAGAGATGGAAGACGTTCTCGGGGATAAGATTATCCTTGGTGATTTGAACGCTTATGGTAAAGAAGATCCTGTATTAGTT CTTACCGAGAATCCACGCAACAAGACGATCGTTACCGCTAGCCACACTTTCCTTGGACCTAAGCCTCAATTTAACGAAGA TGGTTCGCCAGCCACTATCACTAAGACTTATGGCTACATCGACATCGTCGGTGAAAAGTTCGAGGATAATGGCAAAACGC CTTGGAGTTACTCTTTCAGTGACGAAATAGGTTCGTTGGATCACATCTTGATCTCACCTTCACTGAAAGATCGCGTGATT GATGCGACTGACTGGCATGTAAATGCGGCTGAGACCGGCCTGTATGACTACCAAAACCGCTTTAAAGGTAGCATCGACGG TACTGGAACGCATAAGTTCTATAAAGCAGACATCTATCGCGCGTCGGATCACGATCCAGCACTGATTACCCTTAGCTATA AGCCTGGTGATGCGGATGCTAACGTGCCTCTGAACTTGCCAAAACTGAGAAAGCTAATCAAGGTTCCTTACCAAATCCCA ACGGGTGTTTCTGCTCAAGTTGGTGATGTAGCGACCGTCAATATGACTCCTACGAATGACGAAGAGCGCTTAGATTTGAG CCAAATGGTGCTGCCTAATGTGGTTATTTCTAATGACGCAACAGCTTTGGTTAATTTCGAAGTCTTTGGTGCGCCATCAG CTATCTACAACGTTAGCGTAAGCCTACAGCGTGATGGCCAAATTGTAGAAGGGTCTAAGCAAACGTTCAAAGCGAAGGTA TCTAACCGAGACTCTTTGATTGCGGACATTGTAGAAGAAGAAATCGATCACACTGGCGGTGATGGCAGTGCTGGTAGCAC TGGCTTCATCAGCTTGTTATCCCTGTTCGGACTTGCAGCTATGCGCCGTCGTCTTCGCAAATAA
Upstream 100 bases:
>100_bases GTCTCTAGAAGGCCGTGTCGGGGAAGCCCCTGAAGCTGGTTACGCATACGTTCGTATGTACTTTTAGTCCTAATTAAATT CAACTTTTATAGAGTTTACT
Downstream 100 bases:
>100_bases GCGTTGTTCTCGACAATGAAGCGCGCTGCCCTTAGGCAGTGCGCTTCCCATCAAAGATTCAAAAAGAGATACGATTATGA GAATTAAAATGAATGCAGTT
Product: extracellular nuclease
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1087_residues MKKSFLSLAIASTISMGAFAGVEDLLITEMTQSSDASVGSVEITNTGSDAFTFTADITAFQRSSGKYDNELLNADAKPLL TGETLAAGASLVLVNSRATEEFRNAIETQGGTVVISTYDSSNKYNNLYMTSDDGFFLKNGDTVIDRVGAVNDNSKWAPNT TLRRKKTADGNNPAQSGTFDATQWQNILPMRFDDLGKSELPAADAEDIMDIFTCPTDKNEIMSPSEVQGTGFTSPLIAAG ETESAEKIAVEGIISAKVSIPNEGFYLRNFAPDNNPETSDGIFVSTSAAGDLKVGQTICIGSKVVEFEGQTQLSADTAFG WNVTDTNIVTEPTDIQVISSDNGSFDKTLERYEGMLVNLPEDLDPSTPSEEAKEDMRITRSFSYNYLLSSKGHNRNNMVA AYKRPNLQPNHLHVAGSPESKAAYEQNNDYRLVIESSPKSGGTDLPYYAGFNSDPHTNYIRIDDSLVNAQGVISQYETEL IPGTDKFDQDYSLTITNQLTSDNFIHNLPRTDEPDLNDTVAEDDFAIRISSQNLFNFFNSPFGGDNNNFGQSRGADSYDE YINQRTKLVEIIRAQDADVMALMEIENNGFGDASAIAEIVNQVNVQYVDERAQDYNGPNSTENRYVFVGFDNNGNQMLDN LDAIGSDAIATGIIYRPSKMSIERTRVIPMPQQKAPTIVNDLGEVIKDQNQEILENGQNYHRDALVVTFIVNQTGKRLTL AVNHLKSKGSTCWEEWQGVEFGNATTWNNRTAPDLDYQGSCAEFRVAGAVHLGEEMEDVLGDKIILGDLNAYGKEDPVLV LTENPRNKTIVTASHTFLGPKPQFNEDGSPATITKTYGYIDIVGEKFEDNGKTPWSYSFSDEIGSLDHILISPSLKDRVI DATDWHVNAAETGLYDYQNRFKGSIDGTGTHKFYKADIYRASDHDPALITLSYKPGDADANVPLNLPKLRKLIKVPYQIP TGVSAQVGDVATVNMTPTNDEERLDLSQMVLPNVVISNDATALVNFEVFGAPSAIYNVSVSLQRDGQIVEGSKQTFKAKV SNRDSLIADIVEEEIDHTGGDGSAGSTGFISLLSLFGLAAMRRRLRK
Sequences:
NA
Specific function: NA
COG id: COG2374
COG function: function code R; Predicted extracellular nuclease
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA