The gene/protein map for NC_011566 is currently unavailable.
Definition Shewanella piezotolerans WP3 chromosome, complete genome.
Accession NC_011566
Length 5,396,476

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 212636898

GI number:

Start: 4380280

End: 4384287

Strand: Reverse

Name: Not Available

Synonym: swp_4176

Alternate gene names: NA

Gene position: NA

Preceding gene: 212636899

Following gene: 212636897

Centisome position: NA

GC content: NA

Gene sequence:

>4008_bases
ATGGATAACTTAGTTAAGAAAGTCGGCAGTGGACTACTGCTCGCCATTATTAGCACCAGCTTTGTTTGGGCTGCAAATGG
CTCCCCCAGTGAACCTGGTGAAAATGAGTTTTTAAGTGGTGCATCAGAATTTGACCTTGAACGATTAAACCCAAACCCGG
AACTAGAGGTTTTGTCTAATAATTTAGCAGGTGAAAACATCTCATTAGTCGATGGCTCAATTTCATTTTCTATTACCGAT
ATTCATATTCCGCTCTCATCAAATTTGGCCGTATCTGTACAGCGTAATTATTCAAGATTGCAAGGGAAGAGTCAGAGGCA
GGCATCGGCATTTGGAGATTGGGAGTTAAATACTCCTACAATTGAATCAACTTATATTATTGGGGACACTAGGTTAACAC
CTAATGGATATGCAGAAACCGCATGTAGCCGAGCATTAACGGCCGGACCAATCAGAGCTGCGCTTGGTCAAACTGTGGAG
CAGTATGAATATTTTAACGGTGTCGATATAAATATTCCTGGAAAAAGTAGTGGGAAGCTAATGGATAGCACAGGGCCTGC
AGACTACACTACAAAGGATAACTTTGCTGTTTTTTGTAAAAAAGATACTGCAGGTAACGAGTATTATAGTGTTAACTCTC
CTGATGGGGTGACCTATACATTTTCTCAGCGCATAACTGAAAAAGCTAAGCCTTTAATGAAGGCTTTCAAAGCCGCTGCA
AGGAAAAAATTAATTTACGCGGTATCTCAAATAGAGGACTCATCTGGTAACCGTATTAAGTATAGTTATGTCGATTCTAG
AATAGCTAGTATTAGCTATATTGCAGTGGGAGTACCATCAGAAGAGTTAGTTCGTTTTAACTATGATAGTTTGAATCGTA
TATCTACGATTGTTGCTGCTGGTAAATCTTGGGCTTATTCATATTCAGGGCAAAATTTATCAAGTGTTACAAGGCCTGAC
GGTAATAATTGGTTATATAATTTTCCTGAATATCATGAATATGCACCGCAAGTTTTACCTCTAAATTTTGGTAGAGATAG
TTTAGTCACTACTGCTCAAGCGCAATGTCAATTCGAAGCTAAAAAGCTAGACCGAAAAGAGTTTTATGTTACTCACCCTA
ACGGGGCTTTTATCCAGTTTAATGTGGGTTTATTAGTGCATGGGAAAACTGATGTCCCTAGTGCTCAGATGATTAGTGCT
AGTGGTATTACCAATAAACCTCTTTTTAATATAAATGCTTGCTATGGCAATATAGGGGTAATTAGTAAAAAAATCACTCT
AAGCCCAAATACTAGCTATCAATGGAATTATCAATTTAGTAACGATGGTGCTCATTGGGACTCTTCGGGCTTTAATCCCT
CTATGTGGGTTGGTATTGCTAATCCTAGATTTAATTCAAATGCACTTTTAGATGGTGAAAAACAAACAAAATGTGCACAA
ATCTCCGATTGTAACGTAATTCCAAACGATTTAGGCTTTGAACAATACGACTTACGCTTATTGACTGTGACGGAACCCGA
CTTGTCGAAAAAGAGGTATTACATTAGCAAGCGCTGGGATCATACTGATGGTGAAATAGTTTCAACGCAGATATCTGACG
CTAGCAGTACTCTACGGCTGAAAGAAGTAAAAGCATTTGTAAAAAGTGCAAAACTCGGCACAACAGAAATTAACTCAGAA
TTTGTTACGACAAACGAAAAAAACCTCGTCTATCGAGCTAATAACAGTAAGAAGAGTGTTGAGCAGGACGGGGTAATTTA
TACAAATGAATATACAAATTATAATTCTTATGGAACGCTTCTTACATCTGTTAGCTATAACAGTGTATCCCCCACACTGA
AACGTTATAGTAAAACTGATTTCCAACATGATATAAATAAATGGCAACTCAACCTGCCAACGAAGTACTATCTTAATACA
TCATCAAGTTTTGGCTCTCCTTATAGAGAAACTATTTACAATAGTAAGTTACAACCTTATCAGCAAAAAACTATGGGGCG
TTTAGTTACAACACATTCCTACCATATAGACGGTAATCTTAAAAAAACGACTTATAATGGCTCAAATCGTTATGAACAGT
TTGAAGACTACTATCGTGGTAAAGCGCGTAAAATAACCCTTCCTTGCGCAATTTCAAATGGCTGTAATACCGCTAACGGT
AGCACTGCCAATACTATGATTGCCAAAGTTGAGGTTAATAGTGATGGTACAACCAAGAGTGTGACGGATTTTAAGGGTTT
TAAAACCTCTTATAGCTATAACGCTATCGGTTGGTTGACTAAAGTTGATTATGCTGATTCAAACTGGACAGACAAAATCA
TCAGTTACGCCAAAGTAACGAGTGCCAACGACGGCATTAGCGGTAGTGGTATTGCTGTGGGGCAGTTAAAGCAAACCATT
ACACAAGGTAATTTTGAGCAGAAGATATATCATGATGGTTTATTGCGGCCTACGTTTACAAGGACGCGCGATAAAGCAGA
TGGCTCAACCATTAATTATCAGCGTAATAATTATGACTATGATAATCGGCCAACGCTGCAAACCTACCCTAGCAGTAGTG
CCAGTAATACCATTGGTATGACGACTGAATACGATGCTCTTGGGCGTGTAATAACTAGCACGCGCCAAAGTGATAATGCT
TTCACTACAGTGGAGTACCTAAGTGGTAATCGTAAACAAGTCACTGACGCCAAAGGTAATGTGACCACCACAACTTATCA
AGCATTTGGTAGCCCGAGCTATAGTAAGCCTACTCTGATTGAAGCGCCAGACAGCAGCGATACTCGCATTAGTTACAACA
AGTTTGACCAAGTCACTTCAATCTCCCAAGGTGGTGTGACTGAAAAACGCTTATACGATGCTTATCAGCAGTTATGTAAG
ACTTACCGCCCAGAAACAGGCGTAACCGCCTATGGTTATAACGCCCAGCGTCAGCCTATTTGGCGCGCAGAAGGGACTAA
TGGCGGCAGTAGTAGCTGCGCTGCGGCTTCAGTTCCCGCCTCGCATAAAGTACTGTTAGCCTATGACAACTTTGGGCAAT
TGAAAACTGAGAACTTTCCCGATACAACTCCAGATAACCACTACCGCTATGACGCCAATGGTAACTTAACCAAGCTCACA
TCGGGCAGCGGCAGCAGTGCTATTGTCTGGGATTACCAATACAACTCACTCAATTTGGTTGAAAAAGAATCCTTAGCCAT
TGATGGCAAGAGCTTTGTGCTGGACTGGGGATATAACGCATTAGGTGCGATTTCCTCACTGAAGTACCCTTCAGGTGAGA
CCGTTAGTTATGCACCAAACGCCCTCGGACAAGCAACCAAGGCGGCAATAACGGCTTACCAGTATGCCAGTGACCTCAGT
TATCATCCCAACGGGCAACTCAAGCGTTTACGTTACGGCAACGGTATTGAGCGCAATATCGCGCTCGACAGCACAGGCCG
GATTGACGAGATAAATGATAAGAAAGGCAGCAGCTACCAGTTACGCCTGGACCCTCGCTACGATAAAAACGACAACGTCA
CCGGGGTCATCGACTGGGTAAGCCGCGTTAACGACATCGACAATATGCACTATGACGGTGTTGATCGCCTTGAAAGCGCC
GACGGTAAGTGGGGAACGGGCAGTTATAGCTACGATGGTTTAGGCAATATCCTCAGTCGCAGTATCAATGGTTCTAGCAT
TAATTATCATTACAACAGCTTAAATCGCCTTAACAATATTACTGGCGCCTATCGTTACAGTTACGGTTATGACACCCGTG
GTAACGTCAAACACAACGGCCGCTACGGCTTAACCTTTAATCGCGCTAATCAGGTGACCGCCGCCAAAGATAATAGTTAT
CGCTATGATGGCCATAATCGACGGGTCAAGCAGACCACACCTAAAGGGGTTAGCTACAGCGTTTATAGCCAAGGTGGTCA
ACTTCTCTATCGACGTAAGCCAAACGGGAACCATATAGACAGCGTGTATGTAGGTAAACAACTAGTTGCCGATGTTGAAC
GTCGTTGA

Upstream 100 bases:

>100_bases
AAAATTCACTCTAATTACTGTTAGCAAACTGTTAACATGTCATGCTTATGTCCTATTTTTTATATTGAAAAATAGCCTTA
TAGCATGGAAATAACTTGTC

Downstream 100 bases:

>100_bases
AGGGAGATAGTGAGATGAAAAAATTAGCGATAGCAACTTCTATTCAAGTGTTTTGTGTAGCTTCTATATGTATGCTGGTT
TTGCTGCTTGGTTCTGTTGT

Product: YD repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1335_residues
MDNLVKKVGSGLLLAIISTSFVWAANGSPSEPGENEFLSGASEFDLERLNPNPELEVLSNNLAGENISLVDGSISFSITD
IHIPLSSNLAVSVQRNYSRLQGKSQRQASAFGDWELNTPTIESTYIIGDTRLTPNGYAETACSRALTAGPIRAALGQTVE
QYEYFNGVDINIPGKSSGKLMDSTGPADYTTKDNFAVFCKKDTAGNEYYSVNSPDGVTYTFSQRITEKAKPLMKAFKAAA
RKKLIYAVSQIEDSSGNRIKYSYVDSRIASISYIAVGVPSEELVRFNYDSLNRISTIVAAGKSWAYSYSGQNLSSVTRPD
GNNWLYNFPEYHEYAPQVLPLNFGRDSLVTTAQAQCQFEAKKLDRKEFYVTHPNGAFIQFNVGLLVHGKTDVPSAQMISA
SGITNKPLFNINACYGNIGVISKKITLSPNTSYQWNYQFSNDGAHWDSSGFNPSMWVGIANPRFNSNALLDGEKQTKCAQ
ISDCNVIPNDLGFEQYDLRLLTVTEPDLSKKRYYISKRWDHTDGEIVSTQISDASSTLRLKEVKAFVKSAKLGTTEINSE
FVTTNEKNLVYRANNSKKSVEQDGVIYTNEYTNYNSYGTLLTSVSYNSVSPTLKRYSKTDFQHDINKWQLNLPTKYYLNT
SSSFGSPYRETIYNSKLQPYQQKTMGRLVTTHSYHIDGNLKKTTYNGSNRYEQFEDYYRGKARKITLPCAISNGCNTANG
STANTMIAKVEVNSDGTTKSVTDFKGFKTSYSYNAIGWLTKVDYADSNWTDKIISYAKVTSANDGISGSGIAVGQLKQTI
TQGNFEQKIYHDGLLRPTFTRTRDKADGSTINYQRNNYDYDNRPTLQTYPSSSASNTIGMTTEYDALGRVITSTRQSDNA
FTTVEYLSGNRKQVTDAKGNVTTTTYQAFGSPSYSKPTLIEAPDSSDTRISYNKFDQVTSISQGGVTEKRLYDAYQQLCK
TYRPETGVTAYGYNAQRQPIWRAEGTNGGSSSCAAASVPASHKVLLAYDNFGQLKTENFPDTTPDNHYRYDANGNLTKLT
SGSGSSAIVWDYQYNSLNLVEKESLAIDGKSFVLDWGYNALGAISSLKYPSGETVSYAPNALGQATKAAITAYQYASDLS
YHPNGQLKRLRYGNGIERNIALDSTGRIDEINDKKGSSYQLRLDPRYDKNDNVTGVIDWVSRVNDIDNMHYDGVDRLESA
DGKWGTGSYSYDGLGNILSRSINGSSINYHYNSLNRLNNITGAYRYSYGYDTRGNVKHNGRYGLTFNRANQVTAAKDNSY
RYDGHNRRVKQTTPKGVSYSVYSQGGQLLYRRKPNGNHIDSVYVGKQLVADVERR

Sequences:
NA

Specific function: NA

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA