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The map label for this gene is rpoD

Identifier: 209965297

GI number:

Start: 2057390

End: 2059336

Strand: Reverse

Name: rpoD

Synonym: RC1_2006

Alternate gene names: NA

Gene position: NA

Preceding gene: 209965298

Following gene: 209965294

Centisome position: NA

GC content: NA

Gene sequence:

>1947_bases
ATGGCCACGAAAGCGACGCAAAGCGCCGAAGTGACGGATACCCGGGAGGACGAAGCCAACGGTCCTCTCATGGATAACAT
GGCGATCGCCGTCAAGAAGATGATCCAGCGCGGCAAGGAGCGCGGATACGTCACCTATGACGAGCTGAACGCCGCCCTGC
CACCGGACCAGTCGTCCTCGGAACAGATCGAGGACACGATGGCCCAGCTCAGCGAGATGGGCATCAATGTCGTCGAGGGC
GAAGAGCCCGAGGACGGACAGGACGCCTCGGGCGATGGCGAGGGCCGCGTCTCGGGCAACCTGGACGACGACGACATCGG
CCGCACCGACGACCCGGTGCGGATGTATCTGCGCGAGATGGGGTCGGTCGAGCTGCTGAGCCGCGAGGGCGAGATCGCCA
TCGCCAAGCGCATCGAGGCCGGCCGCGAGATGATGATCGGCGCGATCTGCGAATCGCCGCTGACCATCCGCGCCATCATC
GAGTGGCATCAGTCCCTGATGGAAGGGAAGATGCTGCTGCGCGACATCATCGACCTGGACGCCACCTACGGCATCGACCC
CGAGTCGGGCGAACCGACGGGCGAGGACCTCTCCGCCGTCGAAGCGGAGTCCGAGGAGGAGGAGACGCCCGAGCGCCCGG
AAGGGGCCGAGGGCGAGCCTGAGGGCGGCGACGAAGAGGGCAACATCTCCCTCTCGGCCATGGAGGCCGAGCTGAAGCCC
AAGGTCATCGAGACCTTCGCCCGGATCGAGGAGACCTACGAGAAGCTGCACAAGGTGCAGGAACAGCGCCTCGCCGTCCT
GCAACGGGGCGAAGAGCTGCCGAAGGGCTCCGACAAGAAGTACGACAAGCTGAAGGCGGAGCTGACGGATCTCGTCAACT
CCGTGCGCCTGAACAATGCCCGGATCGAGCAGCTCGTCGAGCAGCTCTACGGCCTGAACCGCAAGCTGCTGGGCTACGAG
GGCAAGCTGCTGCGGCTGGCGACCGACTGCAAGATCAAGCGCGAGGACTTCCTGCATCATTATTACGGCAGCGAGCTGGA
CCCGAACTGGCTGGAACGCTGCCGTGGCCTGAGCAAGAGCTGGGGCCGGTTCGCCGACAAGTCCTCGGTCGAAGTGGGCC
GCGTGCGCGAGGCCATCTCCGAGGTGGCCGACCAGGTGCGCCTGCCGATCGGCGAGTTCCGCCGCATCGTCTCCACCGTC
CAGAAGGGCGAGAAGGAGGCGAGCCGCGCCAAGAAGGAGATGGTGGAGGCGAACCTCCGCCTCGTCATCTCCATCGCCAA
GAAGTACACGAACCGCGGTCTGCAGTTCCTGGACCTGATCCAGGAGGGCAACATCGGCCTGATGAAGGCGGTGGACAAGT
TCGAGTACCGCCGCGGCTACAAGTTCAGCACCTACGCGACCTGGTGGATCCGGCAGGCGATCACCCGCTCGATCGCCGAT
CAGGCCCGCACCATCCGCATCCCCGTGCACATGATCGAGACGATCAACAAGCTGGTGCGCACCTCGCGCCAGATGCTGCA
CGAGATCGGGCGCGAGCCGACGCCGGAGGAACTGGCCGAACGGCTGATGATGCCGCTGGAGAAGGTGCGCAAGGTCCTGA
AGATCGCCAAGGAGCCGATCTCCCTCGAAACGCCGATCGGCGACGAGGAGGATTCACACCTCGGCGACTTCATCGAGGAC
AAGAACGCCGTCCTGCCGCTGGACGCCGCCATCCAGGCGAACCTGCGCGAGACGACGACCCGCATCCTCGCCACCCTGAC
CCCGCGTGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACGCTGGAAGAGGTCGGCCAGC
AGTTCAGCGTCACGCGCGAGCGTATCCGCCAGATCGAGGCGAAGGCCCTGCGCAAGCTCAAGCACCCCTCGCGTTCGCGC
AAGCTGCGGAGCTTCCTGGATACGTGA

Upstream 100 bases:

>100_bases
AGTTTGAGCGAAGTCGGTCATCTCTGCGGCCGGGCTGTTGCCCGAGTCGCCTGCAAGCGTTTACGGGTTCCAGCGGAGTG
AGTGCGGGGGCATCGACATA

Downstream 100 bases:

>100_bases
GGCCCGGGCGGCGGGAAACCGCCGCCTGCGGATCGGCTCTGACGACAGGACGGGAAGGGGCGGGGCCTACGGGGCGCCGC
CCCTTTTCTTTTCTGCATGC

Product: RNA polymerase sigma factor RpoD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>648_residues
MATKATQSAEVTDTREDEANGPLMDNMAIAVKKMIQRGKERGYVTYDELNAALPPDQSSSEQIEDTMAQLSEMGINVVEG
EEPEDGQDASGDGEGRVSGNLDDDDIGRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREMMIGAICESPLTIRAII
EWHQSLMEGKMLLRDIIDLDATYGIDPESGEPTGEDLSAVEAESEEEETPERPEGAEGEPEGGDEEGNISLSAMEAELKP
KVIETFARIEETYEKLHKVQEQRLAVLQRGEELPKGSDKKYDKLKAELTDLVNSVRLNNARIEQLVEQLYGLNRKLLGYE
GKLLRLATDCKIKREDFLHHYYGSELDPNWLERCRGLSKSWGRFADKSSVEVGRVREAISEVADQVRLPIGEFRRIVSTV
QKGEKEASRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIAD
QARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPEELAERLMMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIED
KNAVLPLDAAIQANLRETTTRILATLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSR
KLRSFLDT

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA