| Definition | Escherichia coli SE11 chromosome, complete genome. |
|---|---|
| Accession | NC_011415 |
| Length | 4,887,515 |
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Identifier: 209921207
GI number:
Start: 4161790
End: 4164312
Strand: Reverse
Name: Not Available
Synonym: ECSE_4016
Alternate gene names: NA
Gene position: NA
Preceding gene: 209921208
Following gene: 209921206
Centisome position: NA
GC content: NA
Gene sequence:
>2523_bases ATGATGACGACCAGAATAGTGGTTGGCCTCACGGCAGGGACGTGTCTGATTTTCTCGCAAAACCTGATGGCCGAGGTCAG TGTATTCAATCCGGCGCTTCTGGAAATCGACCATCAATCCGGAGTCGATATTCGCCAGTTTAATCGGGCAAACCTGATGC CCCCAGGTGTTTATAGCGTTGATATTTTTATCAACGGTAAAATGTTTGAACGTCAGGATGTGACATTTGTTCAGGATAAT CCAGATGCTGATCTGCACGCATGCTTTATTGCCATTAAAAAAACACTGTCCTCCTTTGGCATAAAAGTTGATGCGCTCAA ATCGTTCAATGATGTGGATGAGACGGTTTGCCTCGATCCTGCTCCACGTATTGAAGGCTCATCCTGGCAGTTTGACAGTG ATAAATTGCAGCTGAATATATCCATTCCCCAAATCTACATGGACGCGATGGCTTATGATTACATCAGCCCCACGCGTTGG GATGAGGGGATTAACGCGCTCACCATCAACTACGATTTTTCTGGTTCACATACACTACGTTCAGATTATGGTTCACAAGA GACAGATACCAGTTATCTCAATCTGCGCAATGGACTGAATATTGGACCGTGGCGGCTACGTAATTACAGTACTTTAAACA CCAGCGATGGCCGTGCGGAATACAACTCCCTTAGTACCTGGATACAGCGCGATATTGCCGCGTTAAGAAGCCAGATTATG ATTGGTGATACGTGGACGGCGAGCGATATTTTCGACAGTACGCAAATTCGCGGCGCGCGTTTGTATACTGATAACGATAT GCTACCCGCCAGCCAGAATGGCTTTGCTCCTGTGGTTCGTGGGATTGCAAAGTCCAACGCCACCGTCATCATTCGGCAGA ATGGCTACGTGATTTATCAGTCTGCCGTTCCACAAGGTGCTTTTGAGATCACCGATCTCAACACCGCCAGTACAGGTGGC GATTTGGACGTAACCATCAAAGAAGAAGACGGTAGCGAACAACGATTCACCCAACCTTATGCTTCATTGGCGATTCTTAA ACGTGAAGGTCAGACAGATGTTGATGTCAGCGTGGGTGAATTGCGCGATGAAGACGGATTTACACCGGACGTCCTTCAGG CGCAAATACTTCATGGTTTTTCCCACGGGATCACTTTATATGGAGGTATGCAGGCTGCTGAAAATTATGGTTCTGCAGCT CTGGGTGTCGGTAAAGATCTTGGCGCTTTGGGCGCAATTTCTTTCGATGTGACACATGCTCGTGCGAATTTTAGCCATGA TGATACAGAAACGGGTCAGTCATATCGCTTTCTCTATTCAAAACGATTTGACGACACAGACACTAGCTTGCGCCTGGTTG GCTATCGTTACTCCACCGAGGGCTACTATACCCTCAATGAGTGGGCATCGCGGCGCAACAGCCCTGAAGACTTTTGGGAA ACAGGTAACCGACGTAGTCGCGTGGAGGGAACGCTAACGCAGTCGTTGGGGAGAGATTATGGCAATTTATACCTGACATT AAGCCGGCAACAATACTGGCATACCGATGATGTCGAACGATTAATGCAATTTGGCTACAGCAGTAGCTGGAAGCGTCTCT CGTGGAACGTCTCCTGGAGTTATTCCAATACTGCCAGACAGGGGACGGGGAACAACCATGCCAGTGATAACACCAGTGAG CAGATCTACATGCTCTCTTTATCTGTTCCTTTATCGGGCTGGTGGGGTAATAGTTACGCCACCTATTCTGTTTCGCAAAA CGATAATTCCGGTAGCTCACATCAACTCGGACTCAGCGGTACGGCGCTGGAAAGAAATAACCTTTCATGGAATTTAATGC AGTCCTATAACAGTCATGATGATGAGGTTGGCGGTAATATGTCCCTGACCTATGATGGCTCTTATGGCACGGTGAACGGC AGCTATAACTACAGCCAAAATTCCCAGAGGCTGAATTATGGTATCAGAGGGGGAATTCTGGCACACAGCGAAGGGGTAAC GTTAAGTCAGGAGTTAGGTGAAACTATTGCTCTTGTTAAAGCACCTGGGGCCGCCGGGTTAGAAATAGATAATATGCGCG GTGCTGCGACGGACTGGCGCGGCTATACGGTCAAGACACAGCTAAACCCTTATGATGAAAATCGGGTAGCAATCAGCGAT AACTATTTCTCGAAGTCGAATATAGAACTTGATAATACCGTCGTTACGATGGTTCCCACGCGTGGTGCAGTGGTTAAAGC GGAGTTTGTGACTCATGTGGGTTATCGCGTTCTCTTCAGAGTGTTAAATGCAAATGGTAAACCGGTACCTTTTGGAGCCA TTGCTGCGATACAAGATGCAAGTTTGGCAGATTCAGGAATTGTCGGTGACCGTGGCGAACTTTATCTTTCTGGTCTACCA GAAAAAGGACAGGTTACGTTATCCTGGGGAGAAAACGCCTCAACAAAATGCATCTTCAATTATTCACTTTCGACACCAGA AAGTGAGAGCGGATTAATTGAACAGGGTGTGACATGTCATTAA
Upstream 100 bases:
>100_bases TGCGGGAGGCCAAATGACCTGGCGATTTATTAATGATTACGGCGCAGTCAGTGACCCGATAAAAATGACGCTGTAAGCAA GGGATAAGGATAGGCGTATT
Downstream 100 bases:
>100_bases AAGGATTTTTATGAACAAGTATATCAAACAGTGGTGCTTTGCTGTGTTTATGCTCTCGTTAAGTAGTGTAGCACTTGCAG CTCCTAAAGGTATCTGTACC
Product: putative fimbrial usher protein LpfC
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>840_residues MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEIDHQSGVDIRQFNRANLMPPGVYSVDIFINGKMFERQDVTFVQDN PDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDPAPRIEGSSWQFDSDKLQLNISIPQIYMDAMAYDYISPTRW DEGINALTINYDFSGSHTLRSDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSLSTWIQRDIAALRSQIM IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQSAVPQGAFEITDLNTASTGG DLDVTIKEEDGSEQRFTQPYASLAILKREGQTDVDVSVGELRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAA LGVGKDLGALGAISFDVTHARANFSHDDTETGQSYRFLYSKRFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVSWSYSNTARQGTGNNHASDNTSE QIYMLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSGTALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNG SYNYSQNSQRLNYGIRGGILAHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISD NYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDASLADSGIVGDRGELYLSGLP EKGQVTLSWGENASTKCIFNYSLSTPESESGLIEQGVTCH
Sequences:
NA
Specific function: NA
COG id: COG3188
COG function: function code NU; P pilus assembly protein, porin PapC
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA