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The map label for this gene is glcD [C]

Identifier: 209552167

GI number: 209552167

Start: 275238

End: 276653

Strand: Reverse

Name: glcD [C]

Synonym: Rleg2_6324

Alternate gene names: 209552167

Gene position: 276653-275238 (Counterclockwise)

Preceding gene: 209552168

Following gene: 209552165

Centisome position: 89.61

GC content: 56.14

Gene sequence:

>1416_bases
ATGACCTCCGTCGAAACCGCCCTTTCCAAGCTCCCGGCCGATATCGTCGTCCGGGACCAGGACATCGTATCAAAGTATAC
GACCGATTTCCGTCATCTATATGCCGGGCGTTCGATGGCGGTACTGCGACCCAGAACAGTCGCAGAGGTCCAACTTGCGG
TTCGTACGCTGGCGGCTCACGGCGTGCCCGTGGTGCCGCAGGGTGGAAATACCAGTTACTGCACTGCCGCCACGCCGAAC
CGCGACGGAAGCGAAATTGTCATCAGTCTCGAACGACTCAACAAGGTCCGCGAGCTCGATATCGGGAACCTGTCGATGAC
AGTCGATGCGGGTTGCGTCCTAAGCGACCTGCAAGATGCAGCTTTGGACAATGACCTAATGTTGCCGCTCAGTCTCGGTT
CAGAGCAGTCTTGCCAGATCGGAGGCAATCTGTCGACAAATGCGGGAGGGATAGCCGTTGTTAAACACGGAATGGCCCGC
GAGCTCGTTCTCGGTTTGGAGGTCGTTTTGCCCGACGGCAGCCTATTCAGCGATCTGAACCCGCTGCGCAAGAACAATTC
CGGCTATGACATGAAGCAATTGTTCATCGGAGGCGAAGGGACGCTGGGGATCATCACCGGAGCTTCGTTGAAGCTTGTTC
GCAAGCCGAGAGCCGTGGTGACTGCTTTCCTGGCCATCCGAGAGATTTCGGTGCTGTCGACGCTCCTCGACCGCGCACAG
CGCTTCACCGGGGATGCCGTTACATCATTCGAATACATGTCGAACAGTTCACTCGATTTGCTTCTTAGTAAGCGACCAAA
CCTTCGTAGACCTCTCGAAGAAGCCAGCGATCACTATGTGCTGCTCGAAGCTGCCACGTCGTCGCATCTGCTCGACCTCC
GGGGTGCGGCGGAGATTCTGCTGGAGGAGGCGATGTCAGATGGACTGGTCATCGACGGCGCGGTCGCGGCAAACGAGGAG
CATCGTAGCCATTTTTGGCATCTGAGGGAGAACATACCAGAAGGCGAGGTCCTAAATGGGGGATCGGTAAAGCACGATGT
TTCCGTTCGTACCTCTCGGCTTGCCGCGTTCATCGTTGATGCCTCCGACATTGTCAGATCGTGCTGCAGTGAGGCGATCC
TGTCTGTTTATGGGCATGTTGGCGATGGAAATGTCCACTTCAACGTGGTCCCGCCGCACACAGCCCAAACCCATGAATTC
AAGGAACACTTCGAACGGACGGTGTCACCGCTGATCTACAACCTTGCTGCTCAAATGGGCGGTTCTTTCAGCGCCGAATA
CGGTATCGGACGTTCCAAGCTCGGTTTGCTTTCGGAATATGGAGACCCTGGCAAGATCGCGTTGATGAGGAAACTCAAGA
CAGCGCTTGATCCGAACGGCATTATGAACCCCGGGAAGGTCATTCCGGTAGCGTAA

Upstream 100 bases:

>100_bases
GAACTGGTCAAGCGCAATCATGTCGGCAAATTGGTCGTCGTGCCCTAACCGAAACGAGCGCAAGCCCTGAAACCTGCGCA
TAAGCTGCGAGCGACCGCTA

Downstream 100 bases:

>100_bases
CTCGATCAGAGAGCGGGTCGTCGCGGCGGCCTGCGAAGCAAACGTTGCCAACATGAGACTACTCGAAGTTCGGTTCGCGC
TTTGCCATAAACGCTCTTGC

Product: FAD linked oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTSVETALSKLPADIVVRDQDIVSKYTTDFRHLYAGRSMAVLRPRTVAEVQLAVRTLAAHGVPVVPQGGNTSYCTAATPN
RDGSEIVISLERLNKVRELDIGNLSMTVDAGCVLSDLQDAALDNDLMLPLSLGSEQSCQIGGNLSTNAGGIAVVKHGMAR
ELVLGLEVVLPDGSLFSDLNPLRKNNSGYDMKQLFIGGEGTLGIITGASLKLVRKPRAVVTAFLAIREISVLSTLLDRAQ
RFTGDAVTSFEYMSNSSLDLLLSKRPNLRRPLEEASDHYVLLEAATSSHLLDLRGAAEILLEEAMSDGLVIDGAVAANEE
HRSHFWHLRENIPEGEVLNGGSVKHDVSVRTSRLAAFIVDASDIVRSCCSEAILSVYGHVGDGNVHFNVVPPHTAQTHEF
KEHFERTVSPLIYNLAAQMGGSFSAEYGIGRSKLGLLSEYGDPGKIALMRKLKTALDPNGIMNPGKVIPVA

Sequences:

>Translated_471_residues
MTSVETALSKLPADIVVRDQDIVSKYTTDFRHLYAGRSMAVLRPRTVAEVQLAVRTLAAHGVPVVPQGGNTSYCTAATPN
RDGSEIVISLERLNKVRELDIGNLSMTVDAGCVLSDLQDAALDNDLMLPLSLGSEQSCQIGGNLSTNAGGIAVVKHGMAR
ELVLGLEVVLPDGSLFSDLNPLRKNNSGYDMKQLFIGGEGTLGIITGASLKLVRKPRAVVTAFLAIREISVLSTLLDRAQ
RFTGDAVTSFEYMSNSSLDLLLSKRPNLRRPLEEASDHYVLLEAATSSHLLDLRGAAEILLEEAMSDGLVIDGAVAANEE
HRSHFWHLRENIPEGEVLNGGSVKHDVSVRTSRLAAFIVDASDIVRSCCSEAILSVYGHVGDGNVHFNVVPPHTAQTHEF
KEHFERTVSPLIYNLAAQMGGSFSAEYGIGRSKLGLLSEYGDPGKIALMRKLKTALDPNGIMNPGKVIPVA
>Mature_470_residues
TSVETALSKLPADIVVRDQDIVSKYTTDFRHLYAGRSMAVLRPRTVAEVQLAVRTLAAHGVPVVPQGGNTSYCTAATPNR
DGSEIVISLERLNKVRELDIGNLSMTVDAGCVLSDLQDAALDNDLMLPLSLGSEQSCQIGGNLSTNAGGIAVVKHGMARE
LVLGLEVVLPDGSLFSDLNPLRKNNSGYDMKQLFIGGEGTLGIITGASLKLVRKPRAVVTAFLAIREISVLSTLLDRAQR
FTGDAVTSFEYMSNSSLDLLLSKRPNLRRPLEEASDHYVLLEAATSSHLLDLRGAAEILLEEAMSDGLVIDGAVAANEEH
RSHFWHLRENIPEGEVLNGGSVKHDVSVRTSRLAAFIVDASDIVRSCCSEAILSVYGHVGDGNVHFNVVPPHTAQTHEFK
EHFERTVSPLIYNLAAQMGGSFSAEYGIGRSKLGLLSEYGDPGKIALMRKLKTALDPNGIMNPGKVIPVA

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=454, Percent_Identity=37.4449339207048, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI37595756, Length=447, Percent_Identity=29.5302013422819, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI37595754, Length=470, Percent_Identity=28.2978723404255, Blast_Score=142, Evalue=6e-34,
Organism=Escherichia coli, GI1789351, Length=484, Percent_Identity=25.6198347107438, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI48994907, Length=283, Percent_Identity=24.3816254416961, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=456, Percent_Identity=33.3333333333333, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI71992373, Length=478, Percent_Identity=29.0794979079498, Blast_Score=141, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI71992381, Length=478, Percent_Identity=28.8702928870293, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71992392, Length=368, Percent_Identity=30.7065217391304, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=178, Percent_Identity=28.0898876404494, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320023, Length=453, Percent_Identity=36.2030905077263, Blast_Score=308, Evalue=1e-84,
Organism=Saccharomyces cerevisiae, GI6320764, Length=482, Percent_Identity=35.0622406639004, Blast_Score=281, Evalue=1e-76,
Organism=Saccharomyces cerevisiae, GI6320027, Length=447, Percent_Identity=27.2930648769575, Blast_Score=149, Evalue=9e-37,
Organism=Drosophila melanogaster, GI18921117, Length=446, Percent_Identity=35.4260089686099, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24639277, Length=446, Percent_Identity=35.4260089686099, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24639275, Length=446, Percent_Identity=35.4260089686099, Blast_Score=249, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24653753, Length=194, Percent_Identity=30.4123711340206, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50642; Mature: 50511

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVETALSKLPADIVVRDQDIVSKYTTDFRHLYAGRSMAVLRPRTVAEVQLAVRTLAAH
CCCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHC
GVPVVPQGGNTSYCTAATPNRDGSEIVISLERLNKVRELDIGNLSMTVDAGCVLSDLQDA
CCEEEECCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
ALDNDLMLPLSLGSEQSCQIGGNLSTNAGGIAVVKHGMARELVLGLEVVLPDGSLFSDLN
HCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEECCCHHHHHHHEEEEEECCCCHHHCCC
PLRKNNSGYDMKQLFIGGEGTLGIITGASLKLVRKPRAVVTAFLAIREISVLSTLLDRAQ
HHHCCCCCCCEEEEEECCCCCEEEEECCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RFTGDAVTSFEYMSNSSLDLLLSKRPNLRRPLEEASDHYVLLEAATSSHLLDLRGAAEIL
HHCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCEEHHHHHHHHH
LEEAMSDGLVIDGAVAANEEHRSHFWHLRENIPEGEVLNGGSVKHDVSVRTSRLAAFIVD
HHHHHCCCEEEECEEECCCHHHHHHHHHHHCCCCCCEECCCCCEEEHHHHHHHHEEEEEC
ASDIVRSCCSEAILSVYGHVGDGNVHFNVVPPHTAQTHEFKEHFERTVSPLIYNLAAQMG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GSFSAEYGIGRSKLGLLSEYGDPGKIALMRKLKTALDPNGIMNPGKVIPVA
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure 
TSVETALSKLPADIVVRDQDIVSKYTTDFRHLYAGRSMAVLRPRTVAEVQLAVRTLAAH
CCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHC
GVPVVPQGGNTSYCTAATPNRDGSEIVISLERLNKVRELDIGNLSMTVDAGCVLSDLQDA
CCEEEECCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEECCHHHHHHHHH
ALDNDLMLPLSLGSEQSCQIGGNLSTNAGGIAVVKHGMARELVLGLEVVLPDGSLFSDLN
HCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEECCCHHHHHHHEEEEEECCCCHHHCCC
PLRKNNSGYDMKQLFIGGEGTLGIITGASLKLVRKPRAVVTAFLAIREISVLSTLLDRAQ
HHHCCCCCCCEEEEEECCCCCEEEEECCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RFTGDAVTSFEYMSNSSLDLLLSKRPNLRRPLEEASDHYVLLEAATSSHLLDLRGAAEIL
HHCCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHCCCCEEEEEECCCCCEEHHHHHHHHH
LEEAMSDGLVIDGAVAANEEHRSHFWHLRENIPEGEVLNGGSVKHDVSVRTSRLAAFIVD
HHHHHCCCEEEECEEECCCHHHHHHHHHHHCCCCCCEECCCCCEEEHHHHHHHHEEEEEC
ASDIVRSCCSEAILSVYGHVGDGNVHFNVVPPHTAQTHEFKEHFERTVSPLIYNLAAQMG
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GSFSAEYGIGRSKLGLLSEYGDPGKIALMRKLKTALDPNGIMNPGKVIPVA
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]