| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence. |
|---|---|
| Accession | NC_011370 |
| Length | 308,747 |
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The map label for this gene is dorA [H]
Identifier: 209552156
GI number: 209552156
Start: 262390
End: 264750
Strand: Reverse
Name: dorA [H]
Synonym: Rleg2_6311
Alternate gene names: 209552156
Gene position: 264750-262390 (Counterclockwise)
Preceding gene: 209552157
Following gene: 209552155
Centisome position: 85.75
GC content: 57.05
Gene sequence:
>2361_bases ATGTCGAAGCAAGAGACTCCCTCAGGTACACAACAGTCGGAGTTCGCGCTCGGACATTGGGGTATGCACCGAATTTCCAG AAGTGCCGCAGGAGAACCCAACCTCATCCCGTGGGAGGGCGATGGCAACCCCAGTCCGATTGGACTGGATCAGCTATCAG ACGAGGTCCAGGCGCTTCGAGTACGCCGCCCGTCCTTCCGCGAAAGCTGGCTGCGCGATGGTGCTGGAGCAAGACGCGAG CGGCGCGGCAGCGATCGGTTCGTCGAGGTACCATGGGACGAAGCTTTCGAACTGGTCGCAATGGAACTAAACCGCGTCAT AGCTACACACGGCAACAAATCGATATTCGGTGGGTCCTATGGATGGGGAAGTGCAGGTCGGTTCCATCACGCCCAAAGTC AAATCCACCGGTTTTTGAACACTGTTGGTGGCTACGTGAAAGGCAGGGATTCCTACAGCTTCGGTGCAGGTTCCGTCATC ATGCCGCACATTGCGGCACCGATGGAGCAATTGCTGGACCAACATACCGACTGGACAACCCTTGCGGCACATTGCGAACT ATTTGTTGCTTTCGGGGGCATTCCCCTTCGAAATGCACAAATGACAGCGGGTGGCCCAAGCCGACACCGGGTCCGAGAAG CGCTTGATCAGATGAGGGCCAGGGGAGTTCGTTTTGTCAACGTTTCTCCGCTCAAACAGGACATAGATGGCCCGGCGGAT TGGATGCCAATCCGGCCAGGCTGCGATGTGGCATTGATACTCGGCCTTCTCCATGTCCTGATCTCGGAAAACTTGGACAA TCGGGAGTTTCTGTCGCGCTACTGTGTCGGCGCTGAGCAGGTGAAGCGTTATGTCCTGGGTGACAAGGACGGGCAGGCCA AGACGCCGCAATGGGCCTCGACGATCACCGGAGTTCCCGCTCAAAAGATTGTCGAGCTTGCGCACGATATCGCTCGGTCA AAAACGATGATCAATGCGTCATGGTCAATCCAACGCCAGAGCCATGGCGAGCAAACCTATTGGGCAATCGTCACACTCGC TGCCCATATCGGTCAGATCGGTCAATCTGGCGGCGGGTTCGGCATCGGCTACGCGACCTTGAACTCTGTTGGGTCAAGCG AACTGGGGATTTCGGGACCAAGGTTGTCTCAGGGTTCAAACGCGGTCAAGGAGTTCATCCCGGTGGCACGGATTGCCGAC GCGCTTCTGAACCCCGGAGCCCGGTTCGATTACGATGGTAGCAACTACAAGTATCCCGACATCCGCCTGATCTATTGGGC GGGGGGAAATCCGTATCATCACCATCAGGACCTGAATCGCTTCATCGATGCCTGGCGAAAGCCCGAGACGATCATCATAC ATGAACAGTTCTGGACGAGCAGCGCGAAAGCGGCCGACATAGTCCTACCGGCCAGCATGACGCTCGAGCGAGATGATATC GGCTTCGCCTCCCGTGAGGGGCAACTCGTTGCCATGAAGCTGTTGCGTGAGCCCATAGCTGATGCGAGGAGCGATTTCGA AATCTTTGCCGGTATCGCCCGAAGTATGGGGAAGGGGCATGAATTTACCGAGGGGCGCACCGCCGAAGAATGGCTTGAAT ATATGTACGAGGAGTTTCGCCAACGAAACAGCTCGATCCTGTCTATCCCTCTCTTCCAGGATTTCTGGGCTGCCGGTCGC GTTGAGTTCCAGACTCCTAACAAGCCTACGATTATGTTCGAGGGATTCAGGACAGACCCTGAGGGGAACCCCCTCAAGAC GCCCTCTGGCCGCATTGAACTGTTTTCTGAAAAAATCGCTGGCTTTGGCTATGATGATTGCCCTGGCCAGGCCACGTGGC TGGAGCCGGTGGAGTGGCTCGGTTCGCAGAAGGCCGATCGTTTCCCATTGCACCTTCTAAGCCAGGAGCCACGTCGGCGC CTCCACAGTCAGTTGGACCATTCCCCGCACAGTCGCGCGGGTAAAGTAAAGGGGAGGGAACCCATTCTTCTCAACCCCAA GGACGCGGACGCCCGGGGAATAGCCGATGGACAGGTAGTCCGCGTGTTCAACGAACGCGGCGCTTGCCTAGCATCTGCCC AAATAACTGAGGACCTCTTGGAGGGCGTTGCGGTGATCGCAACAGGCGCATGGTTCGATCCCACGGAGTGGAAGCCTACT AACAGTCTCGAGAAACATGGCAATCCAAATGCTGTGACGATTGATGCGCCTGCCTCGAAGCTCTCGCAGGCCACGGTTGC GCAGTCGTGTCTCGTCCAGGTCGAAGCCTTCGTCGGAGAGCTTCCGGCGGTAACTGCGTTTGACCTGCCGGAATTCGCAC CTGCACTAGAAAACGAAGCGTATCAATCCTCGCAGGTGTAG
Upstream 100 bases:
>100_bases AGTTTTGCGCTCTTGGTGCTCGTTGCCATCGTAAGCAACACTGCTCGCGCACCCCTCGCATAGTCGCGGTGTCGCGGACA GCAAAAATTTCGGAACGAAG
Downstream 100 bases:
>100_bases ACATCCTACCCATTAGGATATAGTAATACCCATCAGTATGTTTGAATCCCGTTCAAGCGCCAAAATGCGTTTAGTTGCAA AGCCCAAAGGGAAAGAGGAG
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: DMSO reductase; DMSOR [H]
Number of amino acids: Translated: 786; Mature: 785
Protein sequence:
>786_residues MSKQETPSGTQQSEFALGHWGMHRISRSAAGEPNLIPWEGDGNPSPIGLDQLSDEVQALRVRRPSFRESWLRDGAGARRE RRGSDRFVEVPWDEAFELVAMELNRVIATHGNKSIFGGSYGWGSAGRFHHAQSQIHRFLNTVGGYVKGRDSYSFGAGSVI MPHIAAPMEQLLDQHTDWTTLAAHCELFVAFGGIPLRNAQMTAGGPSRHRVREALDQMRARGVRFVNVSPLKQDIDGPAD WMPIRPGCDVALILGLLHVLISENLDNREFLSRYCVGAEQVKRYVLGDKDGQAKTPQWASTITGVPAQKIVELAHDIARS KTMINASWSIQRQSHGEQTYWAIVTLAAHIGQIGQSGGGFGIGYATLNSVGSSELGISGPRLSQGSNAVKEFIPVARIAD ALLNPGARFDYDGSNYKYPDIRLIYWAGGNPYHHHQDLNRFIDAWRKPETIIIHEQFWTSSAKAADIVLPASMTLERDDI GFASREGQLVAMKLLREPIADARSDFEIFAGIARSMGKGHEFTEGRTAEEWLEYMYEEFRQRNSSILSIPLFQDFWAAGR VEFQTPNKPTIMFEGFRTDPEGNPLKTPSGRIELFSEKIAGFGYDDCPGQATWLEPVEWLGSQKADRFPLHLLSQEPRRR LHSQLDHSPHSRAGKVKGREPILLNPKDADARGIADGQVVRVFNERGACLASAQITEDLLEGVAVIATGAWFDPTEWKPT NSLEKHGNPNAVTIDAPASKLSQATVAQSCLVQVEAFVGELPAVTAFDLPEFAPALENEAYQSSQV
Sequences:
>Translated_786_residues MSKQETPSGTQQSEFALGHWGMHRISRSAAGEPNLIPWEGDGNPSPIGLDQLSDEVQALRVRRPSFRESWLRDGAGARRE RRGSDRFVEVPWDEAFELVAMELNRVIATHGNKSIFGGSYGWGSAGRFHHAQSQIHRFLNTVGGYVKGRDSYSFGAGSVI MPHIAAPMEQLLDQHTDWTTLAAHCELFVAFGGIPLRNAQMTAGGPSRHRVREALDQMRARGVRFVNVSPLKQDIDGPAD WMPIRPGCDVALILGLLHVLISENLDNREFLSRYCVGAEQVKRYVLGDKDGQAKTPQWASTITGVPAQKIVELAHDIARS KTMINASWSIQRQSHGEQTYWAIVTLAAHIGQIGQSGGGFGIGYATLNSVGSSELGISGPRLSQGSNAVKEFIPVARIAD ALLNPGARFDYDGSNYKYPDIRLIYWAGGNPYHHHQDLNRFIDAWRKPETIIIHEQFWTSSAKAADIVLPASMTLERDDI GFASREGQLVAMKLLREPIADARSDFEIFAGIARSMGKGHEFTEGRTAEEWLEYMYEEFRQRNSSILSIPLFQDFWAAGR VEFQTPNKPTIMFEGFRTDPEGNPLKTPSGRIELFSEKIAGFGYDDCPGQATWLEPVEWLGSQKADRFPLHLLSQEPRRR LHSQLDHSPHSRAGKVKGREPILLNPKDADARGIADGQVVRVFNERGACLASAQITEDLLEGVAVIATGAWFDPTEWKPT NSLEKHGNPNAVTIDAPASKLSQATVAQSCLVQVEAFVGELPAVTAFDLPEFAPALENEAYQSSQV >Mature_785_residues SKQETPSGTQQSEFALGHWGMHRISRSAAGEPNLIPWEGDGNPSPIGLDQLSDEVQALRVRRPSFRESWLRDGAGARRER RGSDRFVEVPWDEAFELVAMELNRVIATHGNKSIFGGSYGWGSAGRFHHAQSQIHRFLNTVGGYVKGRDSYSFGAGSVIM PHIAAPMEQLLDQHTDWTTLAAHCELFVAFGGIPLRNAQMTAGGPSRHRVREALDQMRARGVRFVNVSPLKQDIDGPADW MPIRPGCDVALILGLLHVLISENLDNREFLSRYCVGAEQVKRYVLGDKDGQAKTPQWASTITGVPAQKIVELAHDIARSK TMINASWSIQRQSHGEQTYWAIVTLAAHIGQIGQSGGGFGIGYATLNSVGSSELGISGPRLSQGSNAVKEFIPVARIADA LLNPGARFDYDGSNYKYPDIRLIYWAGGNPYHHHQDLNRFIDAWRKPETIIIHEQFWTSSAKAADIVLPASMTLERDDIG FASREGQLVAMKLLREPIADARSDFEIFAGIARSMGKGHEFTEGRTAEEWLEYMYEEFRQRNSSILSIPLFQDFWAAGRV EFQTPNKPTIMFEGFRTDPEGNPLKTPSGRIELFSEKIAGFGYDDCPGQATWLEPVEWLGSQKADRFPLHLLSQEPRRRL HSQLDHSPHSRAGKVKGREPILLNPKDADARGIADGQVVRVFNERGACLASAQITEDLLEGVAVIATGAWFDPTEWKPTN SLEKHGNPNAVTIDAPASKLSQATVAQSCLVQVEAFVGELPAVTAFDLPEFAPALENEAYQSSQV
Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=740, Percent_Identity=37.8378378378378, Blast_Score=522, Evalue=1e-149, Organism=Escherichia coli, GI145693196, Length=737, Percent_Identity=40.0271370420624, Blast_Score=505, Evalue=1e-144, Organism=Escherichia coli, GI1787231, Length=792, Percent_Identity=39.1414141414141, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1787870, Length=722, Percent_Identity=30.8864265927978, Blast_Score=305, Evalue=7e-84, Organism=Escherichia coli, GI87081797, Length=779, Percent_Identity=29.3966623876765, Blast_Score=295, Evalue=6e-81, Organism=Escherichia coli, GI171474008, Length=725, Percent_Identity=30.3448275862069, Blast_Score=278, Evalue=1e-75, Organism=Escherichia coli, GI3868721, Length=652, Percent_Identity=22.8527607361963, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 86880; Mature: 86748
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQETPSGTQQSEFALGHWGMHRISRSAAGEPNLIPWEGDGNPSPIGLDQLSDEVQALR CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH VRRPSFRESWLRDGAGARRERRGSDRFVEVPWDEAFELVAMELNRVIATHGNKSIFGGSY HCCCCHHHHHHHCCCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GWGSAGRFHHAQSQIHRFLNTVGGYVKGRDSYSFGAGSVIMPHIAAPMEQLLDQHTDWTT CCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH LAAHCELFVAFGGIPLRNAQMTAGGPSRHRVREALDQMRARGVRFVNVSPLKQDIDGPAD HHHHHHHHEEECCCEECCCEECCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCC WMPIRPGCDVALILGLLHVLISENLDNREFLSRYCVGAEQVKRYVLGDKDGQAKTPQWAS CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHH TITGVPAQKIVELAHDIARSKTMINASWSIQRQSHGEQTYWAIVTLAAHIGQIGQSGGGF HHCCCCHHHHHHHHHHHHHHCEEEECCEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC GIGYATLNSVGSSELGISGPRLSQGSNAVKEFIPVARIADALLNPGARFDYDGSNYKYPD EEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IRLIYWAGGNPYHHHQDLNRFIDAWRKPETIIIHEQFWTSSAKAADIVLPASMTLERDDI EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCEEEECCCCEEECCCC GFASREGQLVAMKLLREPIADARSDFEIFAGIARSMGKGHEFTEGRTAEEWLEYMYEEFR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH QRNSSILSIPLFQDFWAAGRVEFQTPNKPTIMFEGFRTDPEGNPLKTPSGRIELFSEKIA HCCCCEEEECCHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC GFGYDDCPGQATWLEPVEWLGSQKADRFPLHLLSQEPRRRLHSQLDHSPHSRAGKVKGRE CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC PILLNPKDADARGIADGQVVRVFNERGACLASAQITEDLLEGVAVIATGAWFDPTEWKPT CEEECCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCC NSLEKHGNPNAVTIDAPASKLSQATVAQSCLVQVEAFVGELPAVTAFDLPEFAPALENEA CCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHH YQSSQV HHCCCC >Mature Secondary Structure SKQETPSGTQQSEFALGHWGMHRISRSAAGEPNLIPWEGDGNPSPIGLDQLSDEVQALR CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH VRRPSFRESWLRDGAGARRERRGSDRFVEVPWDEAFELVAMELNRVIATHGNKSIFGGSY HCCCCHHHHHHHCCCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GWGSAGRFHHAQSQIHRFLNTVGGYVKGRDSYSFGAGSVIMPHIAAPMEQLLDQHTDWTT CCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH LAAHCELFVAFGGIPLRNAQMTAGGPSRHRVREALDQMRARGVRFVNVSPLKQDIDGPAD HHHHHHHHEEECCCEECCCEECCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCC WMPIRPGCDVALILGLLHVLISENLDNREFLSRYCVGAEQVKRYVLGDKDGQAKTPQWAS CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHH TITGVPAQKIVELAHDIARSKTMINASWSIQRQSHGEQTYWAIVTLAAHIGQIGQSGGGF HHCCCCHHHHHHHHHHHHHHCEEEECCEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC GIGYATLNSVGSSELGISGPRLSQGSNAVKEFIPVARIADALLNPGARFDYDGSNYKYPD EEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IRLIYWAGGNPYHHHQDLNRFIDAWRKPETIIIHEQFWTSSAKAADIVLPASMTLERDDI EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCEEEECCCCEEECCCC GFASREGQLVAMKLLREPIADARSDFEIFAGIARSMGKGHEFTEGRTAEEWLEYMYEEFR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH QRNSSILSIPLFQDFWAAGRVEFQTPNKPTIMFEGFRTDPEGNPLKTPSGRIELFSEKIA HCCCCEEEECCHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHC GFGYDDCPGQATWLEPVEWLGSQKADRFPLHLLSQEPRRRLHSQLDHSPHSRAGKVKGRE CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC PILLNPKDADARGIADGQVVRVFNERGACLASAQITEDLLEGVAVIATGAWFDPTEWKPT CEEECCCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCC NSLEKHGNPNAVTIDAPASKLSQATVAQSCLVQVEAFVGELPAVTAFDLPEFAPALENEA CCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHH YQSSQV HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8856102; 8890911; 8890912; 10835270; 10985771 [H]