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The map label for this gene is etfB [H]

Identifier: 209552154

GI number: 209552154

Start: 259636

End: 260385

Strand: Reverse

Name: etfB [H]

Synonym: Rleg2_6309

Alternate gene names: 209552154

Gene position: 260385-259636 (Counterclockwise)

Preceding gene: 209552155

Following gene: 209552153

Centisome position: 84.34

GC content: 59.73

Gene sequence:

>750_bases
ATGAAAGTTCTCGTTCCCGTTAAGCGGGTTGTCGATTACAACGTGAAGATCCGCGTAAGGCCGGATGGCACAGGCGTTGA
GCTCTCCAACGTCAAGATGTCGATGAACCCTTTCGATGAGATCTCCGTCGAAGAGGCGCTGCGGCTGAAAGAGGGCGGAA
ACGCTACGGAAGTTGTTGTCGTCTCGATCGGCCCTGCCAAGGCGGAGGAGACCCTGCGCACAGCCCTTGCCATGGGCGCC
GACCGTGCAATCCTGGTCGAGACCGATGATCACGTTGAGCCGCTCGCTGTCGCCAAGATCCTTAAGGGCGTGGCGGATGC
CGAGAAGCCCGGCCTTGTCATCGTCGGCAAGCAAGCTATCGATGACGACAGCAATCAAACCGGCCAGATGTTAGCGGCGC
TGTTGAATGTAGCTCAGGCCACCTTCGCTTCCGCGATCGAAGTCTCGGAGGGAAGGGCCTTGGTGACAAGGGAAATCGAC
GGCGGCTTGCAGACGATCGAGATCAAGCTGCCGGCTGTGGTCACATCGGATCTGCGGCTGAACGAACCGCGTTATGCCTC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGCTCGACAGGAAAAGCCCGGACGATTTCGGCGTCTCCACCGCACCGC
GTCTGAAAGTGCTGAAGACCGAGGAACCATCCGGCCGCAAGGCGGGCGTCAAGGTCGAGTCGGTCGCCGAACTGGTCGAG
AAGCTCAAGACCGAGGCCGGCGTCCTCTAA

Upstream 100 bases:

>100_bases
GGTATTGTACTAATAGGAATGTCTTTGTACTAATGCGTATAGTAAGCTGGCGTCAAGCGGGTTAATCGGCCGAGGCCGAG
CTTTTGGCATGGAGACAAAC

Downstream 100 bases:

>100_bases
GGTTCGAGAAAGGAATATATCGATGGCCATTCTTCTTCTGGCTGACCACGACAATGCAACCCTTTCCGACCAGACCGGCA
AGGCACTGACGGCCGCTTCC

Product: electron transfer flavoprotein alpha/beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVPVKRVVDYNVKIRVRPDGTGVELSNVKMSMNPFDEISVEEALRLKEGGNATEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDHVEPLAVAKILKGVADAEKPGLVIVGKQAIDDDSNQTGQMLAALLNVAQATFASAIEVSEGRALVTREID
GGLQTIEIKLPAVVTSDLRLNEPRYASLPNIMKAKKKPLDRKSPDDFGVSTAPRLKVLKTEEPSGRKAGVKVESVAELVE
KLKTEAGVL

Sequences:

>Translated_249_residues
MKVLVPVKRVVDYNVKIRVRPDGTGVELSNVKMSMNPFDEISVEEALRLKEGGNATEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDHVEPLAVAKILKGVADAEKPGLVIVGKQAIDDDSNQTGQMLAALLNVAQATFASAIEVSEGRALVTREID
GGLQTIEIKLPAVVTSDLRLNEPRYASLPNIMKAKKKPLDRKSPDDFGVSTAPRLKVLKTEEPSGRKAGVKVESVAELVE
KLKTEAGVL
>Mature_249_residues
MKVLVPVKRVVDYNVKIRVRPDGTGVELSNVKMSMNPFDEISVEEALRLKEGGNATEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDHVEPLAVAKILKGVADAEKPGLVIVGKQAIDDDSNQTGQMLAALLNVAQATFASAIEVSEGRALVTREID
GGLQTIEIKLPAVVTSDLRLNEPRYASLPNIMKAKKKPLDRKSPDDFGVSTAPRLKVLKTEEPSGRKAGVKVESVAELVE
KLKTEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=58.7044534412955, Blast_Score=274, Evalue=4e-74,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=57.7586206896552, Blast_Score=252, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=54.5454545454545, Blast_Score=245, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=52, Blast_Score=241, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=57.7235772357724, Blast_Score=255, Evalue=2e-68,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=57.7235772357724, Blast_Score=255, Evalue=2e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26638; Mature: 26638

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVVDYNVKIRVRPDGTGVELSNVKMSMNPFDEISVEEALRLKEGGNATEVVV
CCEEECCHHHHCCCEEEEEECCCCCEEEECEEEECCCCHHCCHHHHHHHHCCCCEEEEEE
VSIGPAKAEETLRTALAMGADRAILVETDDHVEPLAVAKILKGVADAEKPGLVIVGKQAI
EEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHC
DDDSNQTGQMLAALLNVAQATFASAIEVSEGRALVTREIDGGLQTIEIKLPAVVTSDLRL
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEEEEEEEECEEEECCCCC
NEPRYASLPNIMKAKKKPLDRKSPDDFGVSTAPRLKVLKTEEPSGRKAGVKVESVAELVE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
KLKTEAGVL
HHHHHHCCC
>Mature Secondary Structure
MKVLVPVKRVVDYNVKIRVRPDGTGVELSNVKMSMNPFDEISVEEALRLKEGGNATEVVV
CCEEECCHHHHCCCEEEEEECCCCCEEEECEEEECCCCHHCCHHHHHHHHCCCCEEEEEE
VSIGPAKAEETLRTALAMGADRAILVETDDHVEPLAVAKILKGVADAEKPGLVIVGKQAI
EEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECHHC
DDDSNQTGQMLAALLNVAQATFASAIEVSEGRALVTREIDGGLQTIEIKLPAVVTSDLRL
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEEEEEEEECEEEECCCCC
NEPRYASLPNIMKAKKKPLDRKSPDDFGVSTAPRLKVLKTEEPSGRKAGVKVESVAELVE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
KLKTEAGVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]