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The map label for this gene is 209552089

Identifier: 209552089

GI number: 209552089

Start: 179786

End: 180400

Strand: Reverse

Name: 209552089

Synonym: Rleg2_6237

Alternate gene names: NA

Gene position: 180400-179786 (Counterclockwise)

Preceding gene: 209552090

Following gene: 209552088

Centisome position: 58.43

GC content: 50.73

Gene sequence:

>615_bases
ATGACCAACCTCCTCCACGACACCCCAAACCGCGGGCCTGCCGAACACGCTGTCCGCGACCAGATCATAAAGACGGCAGC
CGACTATTTCGGCCATTATGGCTACACAAAAACGACGGTTGCGGACCTCGCTCGTGAATTGGGATTTTCGAAAACATATG
TCTATCGCTTTTTCGAATCGAAACAGGCGATAGGCGAAGAGATTTGCGCAGCGCATCTGACTGTTCTTCTAGATAACGCC
AGAGAAGAGCTGCGCAAGGGCACAAGTGCGTCTGACCAGCTCAGGCGCTTTTTTGGAAGTGTTTCAGCGCACACTGCTAG
GCTTCTACACGAAGATAAAAGAATATATGAGATTGCCGTTATCGCATGCATAGAGGATTGGGCTCCCGCCATTTCTTATC
TCGATACTTTGCGGGCTATCATTACCGATATTGTCCAATATGGCCGTGACCGCGGCGAGTTCGAGAAAAAGACGCCTATC
GACGAGATATCGCGATCGATTCTGTTTGCGATGACCCCTTTCATTGACCCCGTCTATCTGGATCGTAACCTAAAGCATCT
GCCCTCGGCACAGACCGAAATGGTAGGATTGGTGCTGAGAAGCCTTGCGGTGTAA

Upstream 100 bases:

>100_bases
CACGACCGCGCCAAGATGATGCAGCAAGTCAGTTGCTAGTTACCAATGTATTATATCGTAATATGTTGTCAGCGGCATTC
CCTCCCTGTATGCTTCTGCA

Downstream 100 bases:

>100_bases
ATTAACAGTTACCAGTTGACAATATGGTAACATGTCTCCAGAATGATCATCACCTCTCGAGGATTGGCTCGTGGGGAAAT
GGTCGTCTGTGCCCCAAGAC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; TetR-Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTNLLHDTPNRGPAEHAVRDQIIKTAADYFGHYGYTKTTVADLARELGFSKTYVYRFFESKQAIGEEICAAHLTVLLDNA
REELRKGTSASDQLRRFFGSVSAHTARLLHEDKRIYEIAVIACIEDWAPAISYLDTLRAIITDIVQYGRDRGEFEKKTPI
DEISRSILFAMTPFIDPVYLDRNLKHLPSAQTEMVGLVLRSLAV

Sequences:

>Translated_204_residues
MTNLLHDTPNRGPAEHAVRDQIIKTAADYFGHYGYTKTTVADLARELGFSKTYVYRFFESKQAIGEEICAAHLTVLLDNA
REELRKGTSASDQLRRFFGSVSAHTARLLHEDKRIYEIAVIACIEDWAPAISYLDTLRAIITDIVQYGRDRGEFEKKTPI
DEISRSILFAMTPFIDPVYLDRNLKHLPSAQTEMVGLVLRSLAV
>Mature_203_residues
TNLLHDTPNRGPAEHAVRDQIIKTAADYFGHYGYTKTTVADLARELGFSKTYVYRFFESKQAIGEEICAAHLTVLLDNAR
EELRKGTSASDQLRRFFGSVSAHTARLLHEDKRIYEIAVIACIEDWAPAISYLDTLRAIITDIVQYGRDRGEFEKKTPID
EISRSILFAMTPFIDPVYLDRNLKHLPSAQTEMVGLVLRSLAV

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23108; Mature: 22976

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLLHDTPNRGPAEHAVRDQIIKTAADYFGHYGYTKTTVADLARELGFSKTYVYRFFES
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH
KQAIGEEICAAHLTVLLDNAREELRKGTSASDQLRRFFGSVSAHTARLLHEDKRIYEIAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IACIEDWAPAISYLDTLRAIITDIVQYGRDRGEFEKKTPIDEISRSILFAMTPFIDPVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
DRNLKHLPSAQTEMVGLVLRSLAV
CCCHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNLLHDTPNRGPAEHAVRDQIIKTAADYFGHYGYTKTTVADLARELGFSKTYVYRFFES
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHH
KQAIGEEICAAHLTVLLDNAREELRKGTSASDQLRRFFGSVSAHTARLLHEDKRIYEIAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IACIEDWAPAISYLDTLRAIITDIVQYGRDRGEFEKKTPIDEISRSILFAMTPFIDPVYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
DRNLKHLPSAQTEMVGLVLRSLAV
CCCHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA