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The map label for this gene is 209552086

Identifier: 209552086

GI number: 209552086

Start: 175281

End: 176654

Strand: Reverse

Name: 209552086

Synonym: Rleg2_6234

Alternate gene names: NA

Gene position: 176654-175281 (Counterclockwise)

Preceding gene: 209552087

Following gene: 209552085

Centisome position: 57.22

GC content: 61.35

Gene sequence:

>1374_bases
ATGGGATTGATAGCGATGAGCGAGCGCGATCTGCAGCGGATCGAGATTTTATCGAAGGTGATCGCCGGCCGGATGAGCAT
GGTGTCGGCGGCGCACGTTCTTGACCTGAGCGAGCGCCAGGTGCGTCGGCTGCTGGAGCGGATGCGCGCTGGTGGCGCGG
TGTCGATCCGGCACAAGGCGATCGGCCGGCCGTCGAACAATCGGATCAGTGATGGTATTCGTGATTATGCGGTAACGCTG
GTTCGCGAACGTTATGCGGATTTCGGACCGACCCTGGCAGCCGAGAAGCTTGCCGAGCGCGATGGATTGCGGGTGTCGCG
CGAGACGCTGCGTCGTTGGATGTCGGAGGCCGGACTTTGGCTGTCGCGCAAGCAGCGGCGGACGTTTCATCAGCCGCGGC
TGCGGCGCGAGGCCTATGGCGAACTGGTGCAGATCGACGGATCCGAGCATCGCTGGTTCGAGGATCGTGGAGATCCGTGT
TCGCTCTTGGTGTTCGTCGATGATGCGACGGGCAGGTTGATGCAGTTGCGCTTCGTGCGCTCGGAAAGCGCCTTCAGCTA
TTTCGACGCACTGGAGCTTTATCTGAAGCATCACGGCGCACCGATCGCCTTTTATTCCGACAAGCACTCGGTGTTCCGGG
TGGCGAAGAAGGATGCCAAGGGTGGCCAGGGCATGACCCAGTTCGGGCGGGCGCTTTCAGAGCTAAATATCGAGATTCTC
TGTGCAAACTCCAGCCAGGCCAAGGGTCGTGTCGAGCGGATGAACCGGACGCTGCAGGATCGGCTGGTCAAGGAATTGCG
GCTGGCGGGCATCGACGACATGGAAGCGGGCAATGCGTTCCTGCCTGGCTTCATGGAGCATCACAATGCGCGGTTTGCGC
TCGTCCCTGCCAGCCCCGGTGACCTGCACCGGCCGATGAATCTCGCCCCGGATCGATTAAAGGAGATCCTGTGCAAACGC
GAGCAGCGCTACGTCGGGGCGCAGCTGACGTTCTCGTTTGAGCGCAAGCGGATCATGCTGGCAGAGAGCGACGTGACGCG
CGGATTGGCTGGCCGCTATGTCGAGACCTATGCCTATGCCGACGGCCGGCTCGATGTAAGATGGAAGGGACACTCCCTGC
CCTACAAGGTGTTCGACAAGGACCAGCGGGTGACGCATGCGGCGATCACCGAGAACAAGCGGCTCGGCGACGTTCTGGCT
TATATCAAGGCGCGCCAGGAGCAGCAGGCAAAGCCTGACGTGAAGACCAACAGCGAGAAGAACGGCTATGTGCGACGGGC
TCACGGTCCGGGACGGCGGAAGGATTTTATGAACGATCCGGCGGTGATCGAACGTCGCAAAGCGGCGCTGGCAAAGCTTG
ATGCTGCCGAGTGA

Upstream 100 bases:

>100_bases
AGCTTTGACATCGCTTGTAGCCGCAAAGTTGAAGTGTCCTGTTTCTGCAAAGTTGGAATGTCACACTCCCCGGGTCTGAA
CGATGCTTGGGAGTTTGCAG

Downstream 100 bases:

>100_bases
GACGTCGATCGCATCGTCTCAAAGCTAAAGCCGAAAGGTGCCCCTCACCCGCCCCGATCTGATCTTGCAACCCGGACCAG
CCGCTCAGATCGGGGCTGAT

Product: integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MGLIAMSERDLQRIEILSKVIAGRMSMVSAAHVLDLSERQVRRLLERMRAGGAVSIRHKAIGRPSNNRISDGIRDYAVTL
VRERYADFGPTLAAEKLAERDGLRVSRETLRRWMSEAGLWLSRKQRRTFHQPRLRREAYGELVQIDGSEHRWFEDRGDPC
SLLVFVDDATGRLMQLRFVRSESAFSYFDALELYLKHHGAPIAFYSDKHSVFRVAKKDAKGGQGMTQFGRALSELNIEIL
CANSSQAKGRVERMNRTLQDRLVKELRLAGIDDMEAGNAFLPGFMEHHNARFALVPASPGDLHRPMNLAPDRLKEILCKR
EQRYVGAQLTFSFERKRIMLAESDVTRGLAGRYVETYAYADGRLDVRWKGHSLPYKVFDKDQRVTHAAITENKRLGDVLA
YIKARQEQQAKPDVKTNSEKNGYVRRAHGPGRRKDFMNDPAVIERRKAALAKLDAAE

Sequences:

>Translated_457_residues
MGLIAMSERDLQRIEILSKVIAGRMSMVSAAHVLDLSERQVRRLLERMRAGGAVSIRHKAIGRPSNNRISDGIRDYAVTL
VRERYADFGPTLAAEKLAERDGLRVSRETLRRWMSEAGLWLSRKQRRTFHQPRLRREAYGELVQIDGSEHRWFEDRGDPC
SLLVFVDDATGRLMQLRFVRSESAFSYFDALELYLKHHGAPIAFYSDKHSVFRVAKKDAKGGQGMTQFGRALSELNIEIL
CANSSQAKGRVERMNRTLQDRLVKELRLAGIDDMEAGNAFLPGFMEHHNARFALVPASPGDLHRPMNLAPDRLKEILCKR
EQRYVGAQLTFSFERKRIMLAESDVTRGLAGRYVETYAYADGRLDVRWKGHSLPYKVFDKDQRVTHAAITENKRLGDVLA
YIKARQEQQAKPDVKTNSEKNGYVRRAHGPGRRKDFMNDPAVIERRKAALAKLDAAE
>Mature_456_residues
GLIAMSERDLQRIEILSKVIAGRMSMVSAAHVLDLSERQVRRLLERMRAGGAVSIRHKAIGRPSNNRISDGIRDYAVTLV
RERYADFGPTLAAEKLAERDGLRVSRETLRRWMSEAGLWLSRKQRRTFHQPRLRREAYGELVQIDGSEHRWFEDRGDPCS
LLVFVDDATGRLMQLRFVRSESAFSYFDALELYLKHHGAPIAFYSDKHSVFRVAKKDAKGGQGMTQFGRALSELNIEILC
ANSSQAKGRVERMNRTLQDRLVKELRLAGIDDMEAGNAFLPGFMEHHNARFALVPASPGDLHRPMNLAPDRLKEILCKRE
QRYVGAQLTFSFERKRIMLAESDVTRGLAGRYVETYAYADGRLDVRWKGHSLPYKVFDKDQRVTHAAITENKRLGDVLAY
IKARQEQQAKPDVKTNSEKNGYVRRAHGPGRRKDFMNDPAVIERRKAALAKLDAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 52164; Mature: 52032

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIAMSERDLQRIEILSKVIAGRMSMVSAAHVLDLSERQVRRLLERMRAGGAVSIRHKA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHH
IGRPSNNRISDGIRDYAVTLVRERYADFGPTLAAEKLAERDGLRVSRETLRRWMSEAGLW
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
LSRKQRRTFHQPRLRREAYGELVQIDGSEHRWFEDRGDPCSLLVFVDDATGRLMQLRFVR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEHH
SESAFSYFDALELYLKHHGAPIAFYSDKHSVFRVAKKDAKGGQGMTQFGRALSELNIEIL
CCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEE
CANSSQAKGRVERMNRTLQDRLVKELRLAGIDDMEAGNAFLPGFMEHHNARFALVPASPG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCC
DLHRPMNLAPDRLKEILCKREQRYVGAQLTFSFERKRIMLAESDVTRGLAGRYVETYAYA
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHEEEC
DGRLDVRWKGHSLPYKVFDKDQRVTHAAITENKRLGDVLAYIKARQEQQAKPDVKTNSEK
CCEEEEEECCCCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
NGYVRRAHGPGRRKDFMNDPAVIERRKAALAKLDAAE
CCEEEECCCCCCCHHCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GLIAMSERDLQRIEILSKVIAGRMSMVSAAHVLDLSERQVRRLLERMRAGGAVSIRHKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEHHH
IGRPSNNRISDGIRDYAVTLVRERYADFGPTLAAEKLAERDGLRVSRETLRRWMSEAGLW
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
LSRKQRRTFHQPRLRREAYGELVQIDGSEHRWFEDRGDPCSLLVFVDDATGRLMQLRFVR
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEHH
SESAFSYFDALELYLKHHGAPIAFYSDKHSVFRVAKKDAKGGQGMTQFGRALSELNIEIL
CCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEE
CANSSQAKGRVERMNRTLQDRLVKELRLAGIDDMEAGNAFLPGFMEHHNARFALVPASPG
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCC
DLHRPMNLAPDRLKEILCKREQRYVGAQLTFSFERKRIMLAESDVTRGLAGRYVETYAYA
CCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHEEEC
DGRLDVRWKGHSLPYKVFDKDQRVTHAAITENKRLGDVLAYIKARQEQQAKPDVKTNSEK
CCEEEEEECCCCCCHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
NGYVRRAHGPGRRKDFMNDPAVIERRKAALAKLDAAE
CCEEEECCCCCCCHHCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]