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The map label for this gene is syrB2 [H]

Identifier: 209552001

GI number: 209552001

Start: 78382

End: 79056

Strand: Reverse

Name: syrB2 [H]

Synonym: Rleg2_6142

Alternate gene names: 209552001

Gene position: 79056-78382 (Counterclockwise)

Preceding gene: 209552002

Following gene: 209552000

Centisome position: 25.61

GC content: 57.19

Gene sequence:

>675_bases
TTGAAAAAAGTGCAACGCAGTTTTGCCGTCGAGTACAAAAGCGGCAAGCGAAAACTCGATTCCAGGTCAAGCTCCATTTG
GGGCAACGTGGATCTAAAGTCAGTCGCGCGCGATCTCGAGGAAGAGGCGCTGCCGTATCTGTCAGATAGCTCTCGGAGTG
GTAAATCCGAGAGCGAAATGTCTTTAGCGGAACACGGTAAGGACAAGTCGTTGTTGACTCCGCCTCTCGAGCCATCGACA
ACTGCATCAGATACACAGGAGATGAGCATGGCCGACGAGACTGATACGACAACCAAGGTCGATGTACCGACCGTTGTCGA
AACGCCCACTGCGCCGAAGAAGCAGCGCAAACCCCGCGCCAAGAAGGCGGCGGCACCTGAGACGGCGTCAGCTGACGCTG
CCTCAGAGCCATCGGCTGCTCTGACTGGCGCCGGTGGCGGAAAGCGGAGAGGGCGCAAGGCGAAGGTGATGGAAGCTGCG
GCGAGCGCTAGACGTGCACCTGTGCGCCGTGCTCCAAAGGCCGTGCAGGTAGCCTCGGCCGCGCCGATGACGGCGATCGA
GGAAATGGAAGATCTCCTGCAGTTGGAAGAAGAAAATCAACGATTGCGCAAGCTTCTTGCTGAAAAACTTCGCGCTGAAA
ATGCCGATCTGCGCAAACGGCTCAAGCTCGATTGA

Upstream 100 bases:

>100_bases
GCCAGTGGTGGGTATAGACTGGCGGTCCGGTATTCGTTATTCCGGACGCACTTGTATGTCGTCACCAAACCATCTCGTGA
ACTCTCCAAGGCCTCTCTTA

Downstream 100 bases:

>100_bases
AATGAGCAGCCGGTCAATCGCCGGCCGCATTTCTATGCTTATCGAGACATACAGTTTGGCGACGGTGGATGCTGTTGCCG
GCACTAAAGTTTGCAGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKKVQRSFAVEYKSGKRKLDSRSSSIWGNVDLKSVARDLEEEALPYLSDSSRSGKSESEMSLAEHGKDKSLLTPPLEPST
TASDTQEMSMADETDTTTKVDVPTVVETPTAPKKQRKPRAKKAAAPETASADAASEPSAALTGAGGGKRRGRKAKVMEAA
ASARRAPVRRAPKAVQVASAAPMTAIEEMEDLLQLEEENQRLRKLLAEKLRAENADLRKRLKLD

Sequences:

>Translated_224_residues
MKKVQRSFAVEYKSGKRKLDSRSSSIWGNVDLKSVARDLEEEALPYLSDSSRSGKSESEMSLAEHGKDKSLLTPPLEPST
TASDTQEMSMADETDTTTKVDVPTVVETPTAPKKQRKPRAKKAAAPETASADAASEPSAALTGAGGGKRRGRKAKVMEAA
ASARRAPVRRAPKAVQVASAAPMTAIEEMEDLLQLEEENQRLRKLLAEKLRAENADLRKRLKLD
>Mature_224_residues
MKKVQRSFAVEYKSGKRKLDSRSSSIWGNVDLKSVARDLEEEALPYLSDSSRSGKSESEMSLAEHGKDKSLLTPPLEPST
TASDTQEMSMADETDTTTKVDVPTVVETPTAPKKQRKPRAKKAAAPETASADAASEPSAALTGAGGGKRRGRKAKVMEAA
ASARRAPVRRAPKAVQVASAAPMTAIEEMEDLLQLEEENQRLRKLLAEKLRAENADLRKRLKLD

Specific function: Seems to affect the transcription of cya3. May be negatively autoregulated [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the syrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 24316; Mature: 24316

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVQRSFAVEYKSGKRKLDSRSSSIWGNVDLKSVARDLEEEALPYLSDSSRSGKSESEM
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
SLAEHGKDKSLLTPPLEPSTTASDTQEMSMADETDTTTKVDVPTVVETPTAPKKQRKPRA
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCEECCCCCCHHHCCCCH
KKAAAPETASADAASEPSAALTGAGGGKRRGRKAKVMEAAASARRAPVRRAPKAVQVASA
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHCCHHHHHHHC
APMTAIEEMEDLLQLEEENQRLRKLLAEKLRAENADLRKRLKLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
>Mature Secondary Structure
MKKVQRSFAVEYKSGKRKLDSRSSSIWGNVDLKSVARDLEEEALPYLSDSSRSGKSESEM
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
SLAEHGKDKSLLTPPLEPSTTASDTQEMSMADETDTTTKVDVPTVVETPTAPKKQRKPRA
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCEECCCCCCHHHCCCCH
KKAAAPETASADAASEPSAALTGAGGGKRRGRKAKVMEAAASARRAPVRRAPKAVQVASA
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHCCHHHHHHHC
APMTAIEEMEDLLQLEEENQRLRKLLAEKLRAENADLRKRLKLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10485295; 11481432 [H]