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The map label for this gene is wcaJ [C]

Identifier: 209550718

GI number: 209550718

Start: 3213906

End: 3214556

Strand: Direct

Name: wcaJ [C]

Synonym: Rleg2_3142

Alternate gene names: 209550718

Gene position: 3213906-3214556 (Clockwise)

Preceding gene: 209550716

Following gene: 209550721

Centisome position: 70.82

GC content: 55.3

Gene sequence:

>651_bases
ATGGCGGGAAAAAATCAGGGCATCAACCCAGCTGACCCCTGGCGGCGTAGCACCGGGGTGCGAAAGGAAGGGCGTCCCTT
CAATTCGTCAAAATCCCATACAATCAGCAGAATTCTGAAGCGCGCGTTAGACCTTGTCATTGCGGCATCTCTTTTATTTC
TTCTGTCGCCGCTCCTTCTGTCGGTAGCAGTCATTATAATGCTCAGCGATCGGGGCGCCGTTTTCAATTCCCATCGGCTT
ATCGGCTATAAGGGAAAAGAGTTCGGTTGCCTCAAGTTTCGGACGACACGATCCGACGCAGCGGCAAGCCTGCATGCGAC
GATCGTCGGCGACATCCTGACGCGATCGAGCCTCGACAAGCTTCCGCAACTGATCAACGTGCTGCTTGGGCAGATGAGCC
TCGTCGGGCCTCGCGCCATTGCCAAGGAAGAACTGCCCCGTTACGGCGAACACGCCTATGCCTACGTCGCAGTCCGTCCC
GGCCTGACCGGTCATTGGCAGATCAGCGAACAGGTCAGTTATCAGAATAGAGTTTTCCTCGACGTCGAGTATCTGCGCAA
TTGGACACTCACGTTGGATTTCATGATCATGGCAAAGACTATGGCGGCCCTGCTTTCCAGGCACGCTTTACTGCCCAAAA
CGGACCTGTAG

Upstream 100 bases:

>100_bases
AAAGAATTTATTCACCATTATGACCTCGGTCACAGACATTAAACCTATAATGAAGCAAGCTTCGGGTGGTATTTCTGGGA
TTCGCCCAACGGAGACGCGG

Downstream 100 bases:

>100_bases
GGTCGTTCGGTTTTCCCTCATACCGCATTATCCGTGGGGGCGTTTGCCGGTCATAGGAGCGCGCTCGGCAACAGAGTTCC
TTTTCCGGCGCTTTTGCATA

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MAGKNQGINPADPWRRSTGVRKEGRPFNSSKSHTISRILKRALDLVIAASLLFLLSPLLLSVAVIIMLSDRGAVFNSHRL
IGYKGKEFGCLKFRTTRSDAAASLHATIVGDILTRSSLDKLPQLINVLLGQMSLVGPRAIAKEELPRYGEHAYAYVAVRP
GLTGHWQISEQVSYQNRVFLDVEYLRNWTLTLDFMIMAKTMAALLSRHALLPKTDL

Sequences:

>Translated_216_residues
MAGKNQGINPADPWRRSTGVRKEGRPFNSSKSHTISRILKRALDLVIAASLLFLLSPLLLSVAVIIMLSDRGAVFNSHRL
IGYKGKEFGCLKFRTTRSDAAASLHATIVGDILTRSSLDKLPQLINVLLGQMSLVGPRAIAKEELPRYGEHAYAYVAVRP
GLTGHWQISEQVSYQNRVFLDVEYLRNWTLTLDFMIMAKTMAALLSRHALLPKTDL
>Mature_215_residues
AGKNQGINPADPWRRSTGVRKEGRPFNSSKSHTISRILKRALDLVIAASLLFLLSPLLLSVAVIIMLSDRGAVFNSHRLI
GYKGKEFGCLKFRTTRSDAAASLHATIVGDILTRSSLDKLPQLINVLLGQMSLVGPRAIAKEELPRYGEHAYAYVAVRPG
LTGHWQISEQVSYQNRVFLDVEYLRNWTLTLDFMIMAKTMAALLSRHALLPKTDL

Specific function: May function as a sugar transferase [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=195, Percent_Identity=34.8717948717949, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 24026; Mature: 23895

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKNQGINPADPWRRSTGVRKEGRPFNSSKSHTISRILKRALDLVIAASLLFLLSPLLL
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVAVIIMLSDRGAVFNSHRLIGYKGKEFGCLKFRTTRSDAAASLHATIVGDILTRSSLDK
HHHHHHHCCCCCCEECCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LPQLINVLLGQMSLVGPRAIAKEELPRYGEHAYAYVAVRPGLTGHWQISEQVSYQNRVFL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEHHHHCCCCEEEE
DVEYLRNWTLTLDFMIMAKTMAALLSRHALLPKTDL
EHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AGKNQGINPADPWRRSTGVRKEGRPFNSSKSHTISRILKRALDLVIAASLLFLLSPLLL
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVAVIIMLSDRGAVFNSHRLIGYKGKEFGCLKFRTTRSDAAASLHATIVGDILTRSSLDK
HHHHHHHCCCCCCEECCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LPQLINVLLGQMSLVGPRAIAKEELPRYGEHAYAYVAVRPGLTGHWQISEQVSYQNRVFL
HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEHHHHCCCCEEEE
DVEYLRNWTLTLDFMIMAKTMAALLSRHALLPKTDL
EHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]