Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
---|---|
Accession | NC_011369 |
Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550716
Identifier: 209550716
GI number: 209550716
Start: 3211473
End: 3212495
Strand: Direct
Name: 209550716
Synonym: Rleg2_3140
Alternate gene names: NA
Gene position: 3211473-3212495 (Clockwise)
Preceding gene: 209550715
Following gene: 209550718
Centisome position: 70.77
GC content: 57.58
Gene sequence:
>1023_bases ATGAGTTATAGGGCTTCCGCCGCCAGTATCTCGCATTACGCAAAAGCCCGCCTGCGCCGCTCACTCAAGGCTCGGCAGGT TCGCTACGACCTGCTGCGCAACGGGCTCAAGCAGGCGCGTCACGTTGTCATCTGCGTCATCCGCGACGAGGGCCACCGGC TGGCATTTTTCCTCCAGTATTATCGCGATCTCGGCTTCGAGCACTTCATCTGCATCGACAACGGCTCGACAGATGGTACG GCCGAATTGCTGTCCGGCTTCGATGATGTCTCCCTTCTTTCTGCCCACGGATCCTACAAGGCGGCGAGATTCGGTAATGA CTGGATCAACGAAGTCATCAACCGGCACTGCCAGGAGAAATGGGTCCTCTATGTCGACGCCGACGAGTTCCTGGTCTATC CGCATTGCGACACACGGCCGATCGATCAACTGACCGCCTATATCGATTCCACCGGCGGCCATTCGCTGCGCTCGGTGATG ATAGACATGTACAGCCCGCATCCCGTTCTCGAAAACATATGCGAACCCGGCCGCAATCCGCTTGAGGTCTGCAATCTCTT CGACCGGTCCGGCTATGTCGCGCATTTCGACGAACGCAACTGGACGATCTGGATCAAGGGCGGTGTTCGCGGTCGGGTGT ATTTCCACGACCGGCTCTGGGACGGTCCCGCGCTCAACAAGATCCCCCTCGTCTATATCGAAGGTGAACGTCTTTTTCTC AAATCATCGCACCAGGTCTGGCCGCTCTCCCTGAATTTGGGCGACATGCGCGGAGCGCTCGGCGTCTCCGGCGCCCTTCT GCATTTCAAGTTCCTGTCGACCTTCGTTCACAAGGTTGCCGATGCGGCGCACCGGTCCCAGCACACGGAGGAATATGCGG TATATTCCTCGAGCAAGGACAAGGATGATTTCGTCTACGACGATACGGGCACCTACCGCAGCTGGAAGGATCTCTCCGAT CACGGGCTCATTCAGGGTGAAGGCTGGAAATACTGGAAGAATGCCTCCGAAAGCGACGTCTAA
Upstream 100 bases:
>100_bases CGCGTGACTGATATCGGCATCGCGGTCGACCCTTGGATTGCAGGCGGACGCGCAACTATTCATCTCTCCATTGCAGGATG GATAATGGTCAGGACAGAAT
Downstream 100 bases:
>100_bases AGCGCGTCGCGATCTTTCGGATTCGCTCCTTGCGCTTTAGGTCTTTGCTTTTACGCATGTCGTTATCGTAAAACCGCTGC ACACTTTTACGCGACATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSYRASAASISHYAKARLRRSLKARQVRYDLLRNGLKQARHVVICVIRDEGHRLAFFLQYYRDLGFEHFICIDNGSTDGT AELLSGFDDVSLLSAHGSYKAARFGNDWINEVINRHCQEKWVLYVDADEFLVYPHCDTRPIDQLTAYIDSTGGHSLRSVM IDMYSPHPVLENICEPGRNPLEVCNLFDRSGYVAHFDERNWTIWIKGGVRGRVYFHDRLWDGPALNKIPLVYIEGERLFL KSSHQVWPLSLNLGDMRGALGVSGALLHFKFLSTFVHKVADAAHRSQHTEEYAVYSSSKDKDDFVYDDTGTYRSWKDLSD HGLIQGEGWKYWKNASESDV
Sequences:
>Translated_340_residues MSYRASAASISHYAKARLRRSLKARQVRYDLLRNGLKQARHVVICVIRDEGHRLAFFLQYYRDLGFEHFICIDNGSTDGT AELLSGFDDVSLLSAHGSYKAARFGNDWINEVINRHCQEKWVLYVDADEFLVYPHCDTRPIDQLTAYIDSTGGHSLRSVM IDMYSPHPVLENICEPGRNPLEVCNLFDRSGYVAHFDERNWTIWIKGGVRGRVYFHDRLWDGPALNKIPLVYIEGERLFL KSSHQVWPLSLNLGDMRGALGVSGALLHFKFLSTFVHKVADAAHRSQHTEEYAVYSSSKDKDDFVYDDTGTYRSWKDLSD HGLIQGEGWKYWKNASESDV >Mature_339_residues SYRASAASISHYAKARLRRSLKARQVRYDLLRNGLKQARHVVICVIRDEGHRLAFFLQYYRDLGFEHFICIDNGSTDGTA ELLSGFDDVSLLSAHGSYKAARFGNDWINEVINRHCQEKWVLYVDADEFLVYPHCDTRPIDQLTAYIDSTGGHSLRSVMI DMYSPHPVLENICEPGRNPLEVCNLFDRSGYVAHFDERNWTIWIKGGVRGRVYFHDRLWDGPALNKIPLVYIEGERLFLK SSHQVWPLSLNLGDMRGALGVSGALLHFKFLSTFVHKVADAAHRSQHTEEYAVYSSSKDKDDFVYDDTGTYRSWKDLSDH GLIQGEGWKYWKNASESDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39033; Mature: 38902
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRASAASISHYAKARLRRSLKARQVRYDLLRNGLKQARHVVICVIRDEGHRLAFFLQY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHH YRDLGFEHFICIDNGSTDGTAELLSGFDDVSLLSAHGSYKAARFGNDWINEVINRHCQEK HHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCCC WVLYVDADEFLVYPHCDTRPIDQLTAYIDSTGGHSLRSVMIDMYSPHPVLENICEPGRNP EEEEEECCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCH LEVCNLFDRSGYVAHFDERNWTIWIKGGVRGRVYFHDRLWDGPALNKIPLVYIEGERLFL HHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEE KSSHQVWPLSLNLGDMRGALGVSGALLHFKFLSTFVHKVADAAHRSQHTEEYAVYSSSKD ECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCC KDDFVYDDTGTYRSWKDLSDHGLIQGEGWKYWKNASESDV CCCEEECCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCC >Mature Secondary Structure SYRASAASISHYAKARLRRSLKARQVRYDLLRNGLKQARHVVICVIRDEGHRLAFFLQY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHH YRDLGFEHFICIDNGSTDGTAELLSGFDDVSLLSAHGSYKAARFGNDWINEVINRHCQEK HHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCCC WVLYVDADEFLVYPHCDTRPIDQLTAYIDSTGGHSLRSVMIDMYSPHPVLENICEPGRNP EEEEEECCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCH LEVCNLFDRSGYVAHFDERNWTIWIKGGVRGRVYFHDRLWDGPALNKIPLVYIEGERLFL HHHHHHHCCCCCEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEECCCEEEE KSSHQVWPLSLNLGDMRGALGVSGALLHFKFLSTFVHKVADAAHRSQHTEEYAVYSSSKD ECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCC KDDFVYDDTGTYRSWKDLSDHGLIQGEGWKYWKNASESDV CCCEEECCCCCCCCCCCCCCCCEEECCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA