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The map label for this gene is ycjO [C]

Identifier: 209550698

GI number: 209550698

Start: 3192099

End: 3192983

Strand: Direct

Name: ycjO [C]

Synonym: Rleg2_3122

Alternate gene names: 209550698

Gene position: 3192099-3192983 (Clockwise)

Preceding gene: 209550697

Following gene: 209550699

Centisome position: 70.34

GC content: 65.42

Gene sequence:

>885_bases
ATGTCGGGCACTTGGCTGACAACCCGCGCGTGGCTGTTGATGCTGCCGCTTCTCGTGGTCATGATATCCGTTATCGGCTG
GCCTTTGATCGATACGGTCGGCCTCTCTTTCACCGATGCCAAGCTCGTCGGCACCGAGGGCAGCTTTGTCGGCCTCGACA
ATTACGCCAGGATGATCTCAGGCTCGAATTTCCAGCGCACGCTGATCACCACCGCATGGTTCGCGATCGTCTCGGTCGCA
GCCGAAATGGTGATCGGCGTCCTTGCCGCCCTGCTGCTGAACCAGCAATTCCGCGGCCGTACTGCTCTCCGCGCCCTGAT
GATCCTGCCCTGGGCGCTGCCGACCGTCGTCAACGCCACGCTCTGGCGGCTGATCTACAATCCGGAGTATGGCGCGCTGA
ACGCCGCGCTGACGCAGCTCGGTCTGCTTGACGCCTATCGCTCCTGGCTTGGCGAACCCGGCACGGCGCTGGCCGCTCTC
ATCGTCGCCGACTGCTGGAAGAACTTCCCGCTGGTGGCGCTGATCGCGCTGGCCGCACTCCAGGCCGTGCCGCGAGACAT
TACCGCCGCCTCGCTGGTCGACGGCGCCGGCGCTTTCGCCCGCTTCCGCTTCGTCATCCTGCCCTATCTCGCCGGCCCGC
TGATGGTGGCGCTGGTGTTGCGCACGATCGAAGCCTTCAAGGTGTTCGACATTATCTGGGTGATGACCCGCGGCGGTCCG
GCCAACAGCACGCGCACGCTGTCGATCCTCGTCTATCAGGAAGCCTTCTCCTTCCAGCGGGCGGGCTCGGGCGCATCGCT
GGCCTTGATCGTCACGCTGCTGGTGACCCTGCTGGCCGCCGGCTATGCCGCCCTGGTGCGCAAGACGGCCGGGAGTGCGG
CCTGA

Upstream 100 bases:

>100_bases
ATCGGCGGCCGACAATAGCGGCCTCTGATCAAACTCAGAAACCCGGGCGCCGCCTGCCGTCGCCCGGCCTCTAAAACTGA
AGAATGAAGAAGGGTCGCCG

Downstream 100 bases:

>100_bases
TGGAACGCCAAAGCCCGCTCTTCTCAGCCTTCATTCACCTTTGCGCGCTGCTGCTTGCCGCCGTCATCCTGGCGCCGATC
CTCTGGCTCTTCATCATGAG

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSGTWLTTRAWLLMLPLLVVMISVIGWPLIDTVGLSFTDAKLVGTEGSFVGLDNYARMISGSNFQRTLITTAWFAIVSVA
AEMVIGVLAALLLNQQFRGRTALRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLGLLDAYRSWLGEPGTALAAL
IVADCWKNFPLVALIALAALQAVPRDITAASLVDGAGAFARFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTLLAAGYAALVRKTAGSAA

Sequences:

>Translated_294_residues
MSGTWLTTRAWLLMLPLLVVMISVIGWPLIDTVGLSFTDAKLVGTEGSFVGLDNYARMISGSNFQRTLITTAWFAIVSVA
AEMVIGVLAALLLNQQFRGRTALRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLGLLDAYRSWLGEPGTALAAL
IVADCWKNFPLVALIALAALQAVPRDITAASLVDGAGAFARFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTLLAAGYAALVRKTAGSAA
>Mature_293_residues
SGTWLTTRAWLLMLPLLVVMISVIGWPLIDTVGLSFTDAKLVGTEGSFVGLDNYARMISGSNFQRTLITTAWFAIVSVAA
EMVIGVLAALLLNQQFRGRTALRALMILPWALPTVVNATLWRLIYNPEYGALNAALTQLGLLDAYRSWLGEPGTALAALI
VADCWKNFPLVALIALAALQAVPRDITAASLVDGAGAFARFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGPA
NSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTLLAAGYAALVRKTAGSAA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=253, Percent_Identity=29.2490118577075, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1789861, Length=271, Percent_Identity=29.520295202952, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=29.5719844357977, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31490; Mature: 31359

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTWLTTRAWLLMLPLLVVMISVIGWPLIDTVGLSFTDAKLVGTEGSFVGLDNYARMIS
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCEECHHHHHHHHC
GSNFQRTLITTAWFAIVSVAAEMVIGVLAALLLNQQFRGRTALRALMILPWALPTVVNAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LWRLIYNPEYGALNAALTQLGLLDAYRSWLGEPGTALAALIVADCWKNFPLVALIALAAL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QAVPRDITAASLVDGAGAFARFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTLLAAGYAALVRKTAGSAA
CCCCEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGTWLTTRAWLLMLPLLVVMISVIGWPLIDTVGLSFTDAKLVGTEGSFVGLDNYARMIS
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEECCCCCEECHHHHHHHHC
GSNFQRTLITTAWFAIVSVAAEMVIGVLAALLLNQQFRGRTALRALMILPWALPTVVNAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LWRLIYNPEYGALNAALTQLGLLDAYRSWLGEPGTALAALIVADCWKNFPLVALIALAAL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QAVPRDITAASLVDGAGAFARFRFVILPYLAGPLMVALVLRTIEAFKVFDIIWVMTRGGP
HHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
ANSTRTLSILVYQEAFSFQRAGSGASLALIVTLLVTLLAAGYAALVRKTAGSAA
CCCCEEEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]