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The map label for this gene is 209550617

Identifier: 209550617

GI number: 209550617

Start: 3100124

End: 3101068

Strand: Direct

Name: 209550617

Synonym: Rleg2_3041

Alternate gene names: NA

Gene position: 3100124-3101068 (Clockwise)

Preceding gene: 209550616

Following gene: 209550618

Centisome position: 68.32

GC content: 61.48

Gene sequence:

>945_bases
ATGGGGGCGGTCGCTGTGAAACCCGACACCTTCAAAAACAAGATCGTCCCCGTCACCACCATCCTGCTCGCTCTCATCGC
CATGTGGTATGTCGCCGCCGTTCTGATGAACGCGCCGTTCCAGCGTGACATGGACAGCCGCGCCGGCGTCACACCGACGA
CAATCGAATTCATCGGCAAGACGCTGGCGCAGCCGAAGCCGATCTTGCCGGCGCCGCATCAGGTGGCGCAAAACGTCTAT
GAGAACACCGTCCTGCGCAGCCTTTCGAGCAATCGCAGCCTAATCTATCACAGCTGGGTGACGCTCTCCTCCACCCTGCT
CGGCTTCGGCTTCGGCATGCTGCTCGGCATTCTTCTTGCGGTGCTGATCGTGCATAACCGCGCCATGGACCGCTCGCTGA
TGCCTTGGCTGGTGGCGAGCCAGACCATCCCGATCCTCGCCATCGCGCCGATGATCGTCATCATCTCCTATAATGTGCTG
ACGGGCGACAATGCGCTTGCGCATCTGCTAAATCTCGATTCCGACGCTTCCCGCCTCGTCTCCAAGGCGCTGATCTCCAC
CTACCTCTCCTTCTTTCCCGTCGCCGTCGGCATGGTGAAGGGCTTGCGGTCACCTGAGATCATGCATCTCGACCTGATGC
GCACCTATTATGCGAGCCCCATACAGACCTTCTGGAAGTTGCGGGTTCCGGCCTCAATTCCCTTTCTCTTCACCTCGATG
AAGGTCGCAATCGCCGCCAGCCTCGTCGGCGCCATCGTCGGCGAGCTCCCGACTGGTGCGGTTGCCGGTATCGGCTCGAA
GCTGCTGGCCGGTTCCTATTACAGCCAGACCATCGATATCTGGGCGGCTCTCGTCGCCGGGTCGCTGCTGGCGGGCATCC
TGGTTGCGATCGTCGGCCTTGCGGCGAAGATCGTCGACCGTGCGATGGGCGGGAGGCCGGCATGA

Upstream 100 bases:

>100_bases
CGACACCCCCGAGTTCCTGGAGATCGCCCATCGTGTCCGCGAAGGGCTGAGGACGGGGCATAGTCATGAGGTTTAAGCGG
TTGAGTTTGGAAGCACACAA

Downstream 100 bases:

>100_bases
GACATCTGACCTTCTCCTGGCAGGGCGTGACCGCCCTTCTCTTCTGCATGGCAGCACTTGTCACCCTGCCGCTTCTGGCC
GAAGGTGCGGCGCAGCCCTT

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MGAVAVKPDTFKNKIVPVTTILLALIAMWYVAAVLMNAPFQRDMDSRAGVTPTTIEFIGKTLAQPKPILPAPHQVAQNVY
ENTVLRSLSSNRSLIYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMIVIISYNVL
TGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDLMRTYYASPIQTFWKLRVPASIPFLFTSM
KVAIAASLVGAIVGELPTGAVAGIGSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIVGLAAKIVDRAMGGRPA

Sequences:

>Translated_314_residues
MGAVAVKPDTFKNKIVPVTTILLALIAMWYVAAVLMNAPFQRDMDSRAGVTPTTIEFIGKTLAQPKPILPAPHQVAQNVY
ENTVLRSLSSNRSLIYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMIVIISYNVL
TGDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDLMRTYYASPIQTFWKLRVPASIPFLFTSM
KVAIAASLVGAIVGELPTGAVAGIGSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIVGLAAKIVDRAMGGRPA
>Mature_313_residues
GAVAVKPDTFKNKIVPVTTILLALIAMWYVAAVLMNAPFQRDMDSRAGVTPTTIEFIGKTLAQPKPILPAPHQVAQNVYE
NTVLRSLSSNRSLIYHSWVTLSSTLLGFGFGMLLGILLAVLIVHNRAMDRSLMPWLVASQTIPILAIAPMIVIISYNVLT
GDNALAHLLNLDSDASRLVSKALISTYLSFFPVAVGMVKGLRSPEIMHLDLMRTYYASPIQTFWKLRVPASIPFLFTSMK
VAIAASLVGAIVGELPTGAVAGIGSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIVGLAAKIVDRAMGGRPA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33554; Mature: 33423

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAVAVKPDTFKNKIVPVTTILLALIAMWYVAAVLMNAPFQRDMDSRAGVTPTTIEFIGK
CCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHH
TLAQPKPILPAPHQVAQNVYENTVLRSLSSNRSLIYHSWVTLSSTLLGFGFGMLLGILLA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
VLIVHNRAMDRSLMPWLVASQTIPILAIAPMIVIISYNVLTGDNALAHLLNLDSDASRLV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCHHHHHH
SKALISTYLSFFPVAVGMVKGLRSPEIMHLDLMRTYYASPIQTFWKLRVPASIPFLFTSM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHH
KVAIAASLVGAIVGELPTGAVAGIGSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIVGL
HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKIVDRAMGGRPA
HHHHHHHHHCCCCC
>Mature Secondary Structure 
GAVAVKPDTFKNKIVPVTTILLALIAMWYVAAVLMNAPFQRDMDSRAGVTPTTIEFIGK
CCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHH
TLAQPKPILPAPHQVAQNVYENTVLRSLSSNRSLIYHSWVTLSSTLLGFGFGMLLGILLA
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
VLIVHNRAMDRSLMPWLVASQTIPILAIAPMIVIISYNVLTGDNALAHLLNLDSDASRLV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCHHHHHH
SKALISTYLSFFPVAVGMVKGLRSPEIMHLDLMRTYYASPIQTFWKLRVPASIPFLFTSM
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHH
KVAIAASLVGAIVGELPTGAVAGIGSKLLAGSYYSQTIDIWAALVAGSLLAGILVAIVGL
HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAKIVDRAMGGRPA
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]