Click here to switch to the map view.

The map label for this gene is amaB [H]

Identifier: 209550612

GI number: 209550612

Start: 3095765

End: 3097018

Strand: Direct

Name: amaB [H]

Synonym: Rleg2_3036

Alternate gene names: 209550612

Gene position: 3095765-3097018 (Clockwise)

Preceding gene: 209550610

Following gene: 209550613

Centisome position: 68.22

GC content: 63.0

Gene sequence:

>1254_bases
ATGGTGGCAGCACCAGGCGAAAACATGCGCGTCAATGGCGACCGTCTCTGGGACAGTCTCATGGACATGGCCAAGATCGG
CCCCGGCATTGCGGGCGGCAACAATCGCCAGACGCTGACGGATTCGGATGCCGAGGGCCGAAGCCTTTTCAAGACATGGT
GCGACGAAGCGGGCCTCACCATGGGCATCGACCAGATGGGCACGATGTTCGCTACCCGCCCCGGCACCGATCCCGATGCC
CTGCCCGTCTATGTCGGTTCGCATCTCGACACTCAGCCGACCGGCGGCAAATATGACGGCGTGCTCGGCGTGCTGGCTGC
CCTCGAAGTCGTGCGCACCATGAACGATCTCGGCATCAAGACCAAACATCCCATTGTCGTCACCAATTGGACGAACGAGG
AAGGGGCACGTTTTGCCCCGGCCATGCTGGCCTCAGGCGTCTTTGCCGGCGTGCACAGCCTCGACTTTGCCTATAATCGC
AAGGATCCCGAGGGCAATCTCTTCGGCGACGAACTGAAACGCATCGGCTGGCTCGGCGACGAAGAGGTCGGTGCCCGCAA
GATGCACGCCTATTTCGAATATCACATCGAGCAGGGTCCGATCCTCGAGGCCGAAGACAAGCAGATCGGCGTCGTCACCC
ACTGTCAGGGCCTCTGGTGGCTGGAATTCACGCTGACCGGCAAGGAAGCCCATACCGGCTCGACGCCGATGAACATGCGC
GTCAATGCCGGGCTTGCCATGTCGCGCATCCTGGAAATGGTTCAAGGCGTGGCGATGGGCGAGCAGCCGGGCGCCGTCGG
CGGTGTCGGGCAGGTGTTCTTCTCGCCGAATTCGCGCAACGTGCTGCCCGGCAAGGTCGTCTTCACCGTCGACATCCGCT
CGCCCGACAAGGCCAAGCTCGACCGCATGCGGGCAAAGATCGAGGCGGAAGCGCCAAAGATCTGCGATGCTTTGGGTGTC
GGCTGTTCCGTCGAGGCGATCGGCCATTTCGCGCCTGTTACCTTCGACGAAAAGCTCGTCAGCTCGGTCCGCTCCGCCGC
CGAGCGCCTCGGCTACAGCCACATGAACCTCATCTCGGGCGCCGGCCACGACGCCTGCTGGGCCGCCAAGGTCGCCCCTG
CGACGATGGTCATGTGCCCCTGCGTCGGCGGTCTGTCGCACAATGAAGCGGAAGACATTTCCAAGGAATGGGCGACGGCG
GGCGCCGATGTTCTGTTCCATGCGGTGGTGGAGACGGCGGAGATTGTTCCGTGA

Upstream 100 bases:

>100_bases
CGGCGCTCGACAAAAGCAATAAGAGGCGTTGGAATAGACCACGGGAACAGGCGGGCATGCCACTTCGCATGGCTGCCGCA
AACAGGTGAGGGCTTGAAGA

Downstream 100 bases:

>100_bases
CTATCGATCTGGACGCAGATCTGGACAGGATGAGCCATCCCGACCTGCTATCGGCGGCGCGAGCCATGCGCCGCGCGATC
CGCAGCCACCGGGACACGTC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MVAAPGENMRVNGDRLWDSLMDMAKIGPGIAGGNNRQTLTDSDAEGRSLFKTWCDEAGLTMGIDQMGTMFATRPGTDPDA
LPVYVGSHLDTQPTGGKYDGVLGVLAALEVVRTMNDLGIKTKHPIVVTNWTNEEGARFAPAMLASGVFAGVHSLDFAYNR
KDPEGNLFGDELKRIGWLGDEEVGARKMHAYFEYHIEQGPILEAEDKQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMNMR
VNAGLAMSRILEMVQGVAMGEQPGAVGGVGQVFFSPNSRNVLPGKVVFTVDIRSPDKAKLDRMRAKIEAEAPKICDALGV
GCSVEAIGHFAPVTFDEKLVSSVRSAAERLGYSHMNLISGAGHDACWAAKVAPATMVMCPCVGGLSHNEAEDISKEWATA
GADVLFHAVVETAEIVP

Sequences:

>Translated_417_residues
MVAAPGENMRVNGDRLWDSLMDMAKIGPGIAGGNNRQTLTDSDAEGRSLFKTWCDEAGLTMGIDQMGTMFATRPGTDPDA
LPVYVGSHLDTQPTGGKYDGVLGVLAALEVVRTMNDLGIKTKHPIVVTNWTNEEGARFAPAMLASGVFAGVHSLDFAYNR
KDPEGNLFGDELKRIGWLGDEEVGARKMHAYFEYHIEQGPILEAEDKQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMNMR
VNAGLAMSRILEMVQGVAMGEQPGAVGGVGQVFFSPNSRNVLPGKVVFTVDIRSPDKAKLDRMRAKIEAEAPKICDALGV
GCSVEAIGHFAPVTFDEKLVSSVRSAAERLGYSHMNLISGAGHDACWAAKVAPATMVMCPCVGGLSHNEAEDISKEWATA
GADVLFHAVVETAEIVP
>Mature_417_residues
MVAAPGENMRVNGDRLWDSLMDMAKIGPGIAGGNNRQTLTDSDAEGRSLFKTWCDEAGLTMGIDQMGTMFATRPGTDPDA
LPVYVGSHLDTQPTGGKYDGVLGVLAALEVVRTMNDLGIKTKHPIVVTNWTNEEGARFAPAMLASGVFAGVHSLDFAYNR
KDPEGNLFGDELKRIGWLGDEEVGARKMHAYFEYHIEQGPILEAEDKQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMNMR
VNAGLAMSRILEMVQGVAMGEQPGAVGGVGQVFFSPNSRNVLPGKVVFTVDIRSPDKAKLDRMRAKIEAEAPKICDALGV
GCSVEAIGHFAPVTFDEKLVSSVRSAAERLGYSHMNLISGAGHDACWAAKVAPATMVMCPCVGGLSHNEAEDISKEWATA
GADVLFHAVVETAEIVP

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=376, Percent_Identity=32.9787234042553, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44672; Mature: 44672

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAPGENMRVNGDRLWDSLMDMAKIGPGIAGGNNRQTLTDSDAEGRSLFKTWCDEAGLT
CCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
MGIDQMGTMFATRPGTDPDALPVYVGSHLDTQPTGGKYDGVLGVLAALEVVRTMNDLGIK
ECHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TKHPIVVTNWTNEEGARFAPAMLASGVFAGVHSLDFAYNRKDPEGNLFGDELKRIGWLGD
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC
EEVGARKMHAYFEYHIEQGPILEAEDKQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMNMR
HHHHHHHHHHHHHEECCCCCEECCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEE
VNAGLAMSRILEMVQGVAMGEQPGAVGGVGQVFFSPNSRNVLPGKVVFTVDIRSPDKAKL
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHH
DRMRAKIEAEAPKICDALGVGCSVEAIGHFAPVTFDEKLVSSVRSAAERLGYSHMNLISG
HHHHHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
AGHDACWAAKVAPATMVMCPCVGGLSHNEAEDISKEWATAGADVLFHAVVETAEIVP
CCCCHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAAPGENMRVNGDRLWDSLMDMAKIGPGIAGGNNRQTLTDSDAEGRSLFKTWCDEAGLT
CCCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE
MGIDQMGTMFATRPGTDPDALPVYVGSHLDTQPTGGKYDGVLGVLAALEVVRTMNDLGIK
ECHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
TKHPIVVTNWTNEEGARFAPAMLASGVFAGVHSLDFAYNRKDPEGNLFGDELKRIGWLGD
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC
EEVGARKMHAYFEYHIEQGPILEAEDKQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMNMR
HHHHHHHHHHHHHEECCCCCEECCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCEEE
VNAGLAMSRILEMVQGVAMGEQPGAVGGVGQVFFSPNSRNVLPGKVVFTVDIRSPDKAKL
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHH
DRMRAKIEAEAPKICDALGVGCSVEAIGHFAPVTFDEKLVSSVRSAAERLGYSHMNLISG
HHHHHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCC
AGHDACWAAKVAPATMVMCPCVGGLSHNEAEDISKEWATAGADVLFHAVVETAEIVP
CCCCHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]