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The map label for this gene is ybhR [H]

Identifier: 209550579

GI number: 209550579

Start: 3068409

End: 3069521

Strand: Direct

Name: ybhR [H]

Synonym: Rleg2_3003

Alternate gene names: 209550579

Gene position: 3068409-3069521 (Clockwise)

Preceding gene: 209550578

Following gene: 209550580

Centisome position: 67.62

GC content: 63.34

Gene sequence:

>1113_bases
ATGGGATGGACAAGGCTCTACGCCCTCATCGTCAAGGAGCTGCTCGCCGTGCTGCGCGACCCCAAGGGCCGCGCCATCCT
GATCGGCCCGCCGATCGTCCAGCTTCTCGTCTTCTCCTATGCCGCAACCTTGGAAGTCCGCAATGTCGACGTGATGATCC
TCAACCGCGACAGCGGTCACTGGGGCCAGGAGCTGATCGAGCGTATCGACGGCTCGCCGACCTTCCGCCGGATCGAGATG
GCGGAAAGCCAGGCGGATATCAGGGTGGCGATCGATAACCAGACGGCCATTGCGGCGGTAGAGATCGGCCCGGACTTTTC
GCGCAATATCGAGGCGGGAACGCCTGCTGATCTGCAGGTGGTGCTCGACGGCCGCCGCTCCAACGCCTCGCAGATCGTCG
CCGGCTACCTCTCACAGATCGGCGGCGCCCTTGCATTCGAAACACCGGCCGGCAGACGCGCCGGCGTCGGCATCGTCTCA
TCGGTGCCGCGCAACTGGTTCAACCCGAACCTCACCTACCAATGGTTCATGGTGCCGAACCTGATCGCCAGCATCGCGCT
TTTGATCGGCCTGATCGTCACGGCCTTGTCGATCGCCCGCGAGCGCGAGCTCGGCACTTTCGACCAGCTGATGGTCTCGC
CGCTGCGCCTGCACGAAATCCTGATCGGCAAGCTGATCCCGCCGATGATGATCGGCCTCTTCCACATCACCGTCTATATT
CTGGCCGCCGTCTTCTTGTTCGAGGTGCCGCTGCGCGGTTCGCTCTTCCTGCTTTACGGCAGCGCGGTTTTCTATCTCGG
CTCGGTCGCCGGCCTCGGCCTCTTCATCTCGGCGCTGTCGATGACGCAGCAGCAGGCGATCCTCGGCGCCTTCCTGTTCA
TGGTCCCGGCCATGCTGCTCTCGGGCTTCGCGACGCCGATCGAAAACATGCCGGCATGGCTGCAGCCCGTGACCCTGATC
AACCCCCTGCGTTATTTCCTGGTGATCGTCAAAGGTGTTTTCCTCAAGGATATCCCCTTGAGCGAGGTGGTGAACCAGAC
CATCCCGCTGGCGCTGATCGCCGCCGTGACGCTCAGCGCCGCCGCCTGGCTCTTCCGCCGGCGCCTAGAATAA

Upstream 100 bases:

>100_bases
ATCTGGCCGATGTTCGCAAAGGCAATCGCCATCATGCTGGCGATCGGCGCCGTCATGTTCGTGCTTGCGGCCCGCAGCAC
CCGGAAGAGGATCGGCTGAG

Downstream 100 bases:

>100_bases
TCCAATACCGCCGCCTGCTTCGGTCGCCTCACAGAATGTGAACCGGCTTGCCAAAGCGTGACTCTCTCCTGCCGGAACCT
CGGATTGGCGTGGTCGTTAC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MGWTRLYALIVKELLAVLRDPKGRAILIGPPIVQLLVFSYAATLEVRNVDVMILNRDSGHWGQELIERIDGSPTFRRIEM
AESQADIRVAIDNQTAIAAVEIGPDFSRNIEAGTPADLQVVLDGRRSNASQIVAGYLSQIGGALAFETPAGRRAGVGIVS
SVPRNWFNPNLTYQWFMVPNLIASIALLIGLIVTALSIARERELGTFDQLMVSPLRLHEILIGKLIPPMMIGLFHITVYI
LAAVFLFEVPLRGSLFLLYGSAVFYLGSVAGLGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPAWLQPVTLI
NPLRYFLVIVKGVFLKDIPLSEVVNQTIPLALIAAVTLSAAAWLFRRRLE

Sequences:

>Translated_370_residues
MGWTRLYALIVKELLAVLRDPKGRAILIGPPIVQLLVFSYAATLEVRNVDVMILNRDSGHWGQELIERIDGSPTFRRIEM
AESQADIRVAIDNQTAIAAVEIGPDFSRNIEAGTPADLQVVLDGRRSNASQIVAGYLSQIGGALAFETPAGRRAGVGIVS
SVPRNWFNPNLTYQWFMVPNLIASIALLIGLIVTALSIARERELGTFDQLMVSPLRLHEILIGKLIPPMMIGLFHITVYI
LAAVFLFEVPLRGSLFLLYGSAVFYLGSVAGLGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPAWLQPVTLI
NPLRYFLVIVKGVFLKDIPLSEVVNQTIPLALIAAVTLSAAAWLFRRRLE
>Mature_369_residues
GWTRLYALIVKELLAVLRDPKGRAILIGPPIVQLLVFSYAATLEVRNVDVMILNRDSGHWGQELIERIDGSPTFRRIEMA
ESQADIRVAIDNQTAIAAVEIGPDFSRNIEAGTPADLQVVLDGRRSNASQIVAGYLSQIGGALAFETPAGRRAGVGIVSS
VPRNWFNPNLTYQWFMVPNLIASIALLIGLIVTALSIARERELGTFDQLMVSPLRLHEILIGKLIPPMMIGLFHITVYIL
AAVFLFEVPLRGSLFLLYGSAVFYLGSVAGLGLFISALSMTQQQAILGAFLFMVPAMLLSGFATPIENMPAWLQPVTLIN
PLRYFLVIVKGVFLKDIPLSEVVNQTIPLALIAAVTLSAAAWLFRRRLE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=365, Percent_Identity=46.027397260274, Blast_Score=320, Evalue=7e-89,
Organism=Escherichia coli, GI1787011, Length=387, Percent_Identity=31.7829457364341, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI48994943, Length=371, Percent_Identity=27.4932614555256, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI226510979, Length=379, Percent_Identity=25.8575197889182, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40549; Mature: 40417

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWTRLYALIVKELLAVLRDPKGRAILIGPPIVQLLVFSYAATLEVRNVDVMILNRDSGH
CCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHEEEECEEEEEEECCCCC
WGQELIERIDGSPTFRRIEMAESQADIRVAIDNQTAIAAVEIGPDFSRNIEAGTPADLQV
HHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEE
VLDGRRSNASQIVAGYLSQIGGALAFETPAGRRAGVGIVSSVPRNWFNPNLTYQWFMVPN
EEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHH
LIASIALLIGLIVTALSIARERELGTFDQLMVSPLRLHEILIGKLIPPMMIGLFHITVYI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAVFLFEVPLRGSLFLLYGSAVFYLGSVAGLGLFISALSMTQQQAILGAFLFMVPAMLL
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFATPIENMPAWLQPVTLINPLRYFLVIVKGVFLKDIPLSEVVNQTIPLALIAAVTLSA
HHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAWLFRRRLE
HHHHHHHHCC
>Mature Secondary Structure 
GWTRLYALIVKELLAVLRDPKGRAILIGPPIVQLLVFSYAATLEVRNVDVMILNRDSGH
CHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHEEEECEEEEEEECCCCC
WGQELIERIDGSPTFRRIEMAESQADIRVAIDNQTAIAAVEIGPDFSRNIEAGTPADLQV
HHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEE
VLDGRRSNASQIVAGYLSQIGGALAFETPAGRRAGVGIVSSVPRNWFNPNLTYQWFMVPN
EEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEHHH
LIASIALLIGLIVTALSIARERELGTFDQLMVSPLRLHEILIGKLIPPMMIGLFHITVYI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAVFLFEVPLRGSLFLLYGSAVFYLGSVAGLGLFISALSMTQQQAILGAFLFMVPAMLL
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGFATPIENMPAWLQPVTLINPLRYFLVIVKGVFLKDIPLSEVVNQTIPLALIAAVTLSA
HHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AAWLFRRRLE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]